RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CPSF7Q8N684 471 aaKnown RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 ZBTB8BQ8NAP8 495 aaPredicted RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 OR2T34Q8NGX1 318 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 ASZ1Q8WWH4 475 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 GAB3Q8WWW8 586 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PYDC1Q8WXC3 89 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 RHBDF1Q96CC6 855 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 ZNF514Q96K75 400 aaPredicted RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 CLPTM1LQ96KA5 538 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 LRGUKQ96M69 825 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 UHRF1Q96T88 793 aaPredicted RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 TMEM79Q9BSE2 394 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 CCM2Q9BSQ5 444 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 WDR55Q9H6Y2 383 aaPredicted RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 SGK2Q9HBY8 427 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 GULP1Q9UBP9 304 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 ZNHIT2Q9UHR6 403 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 EIF2B4Q9UI10 523 aaKnown RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 AK5Q9Y6K8 562 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 LAMA1P25391 3075 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 A0A1B0GTL3 188 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CCDC160A6NGH7 325 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 LRRC72A6NJI9 287 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 C10orf142B7Z368 130 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 E9PBE3 544 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 VEGFDO43915 354 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 KLHL41O60662 606 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PSIP1O75475 530 aaKnown RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 TRMUO75648 421 aaKnown RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 SEMA4FO95754 770 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PAK4O96013 591 aaPredicted RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.039e-7■□□□□ 8.9
DDB1-213ENST00000539332 CDK4P11802 303 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 MAPK1P28482 360 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 EPHA3P29320 983 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 MAT2AP31153 395 aaKnown RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 GPR1P46091 355 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CXCL12P48061 93 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PXNP49023 591 aaPredicted RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 MTTPP55157 894 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 AP1S2P56377 157 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 NUP107P57740 925 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 APOFQ13790 326 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 ZNF648Q5T619 568 aaPredicted RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 LPCAT4Q643R3 524 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 RAET1GQ6H3X3 334 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 DHRS4L2Q6PKH6 230 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 C16orf89Q6UX73 402 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 SYVN1Q86TM6 617 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TRIM69Q86WT6 500 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 KLHDC8AQ8IYD2 350 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TCAIMQ8N3R3 496 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CAMKK1Q8N5S9 505 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PLA2G15Q8NCC3 412 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 OR56A4Q8NGH8 313 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CEP70Q8NHQ1 597 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 FBXO27Q8NI29 283 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 KLK6Q92876 244 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 RTKNQ9BST9 563 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 SLC17A9Q9BYT1 436 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TPSD1Q9BZJ3 242 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PARVBQ9HBI1 364 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TRIM39Q9HCM9 518 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 MID1IP1Q9NPA3 183 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 MRGBPQ9NV56 204 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CYP8B1Q9UNU6 501 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 GPR34Q9UPC5 381 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PDE10AQ9Y233 779 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 POMPQ9Y244 141 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 DNAJC15Q9Y5T4 150 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 GOLGA8QA0A0J9YX86 632 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 C17orf113A0A1B0GUU1 675 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 GOLGA8OA6NCC3 632 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TMEM202A6NGA9 273 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 NCF1BA6NI72 391 aaPredicted RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 OR2AG2A6NM03 316 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 NCF1CA8MVU1 366 aaPredicted RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 GOLGA8NF8WBI6 632 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 INPP4BO15327 924 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 LATO43561 262 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 ATP6V1G1O75348 118 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 ZNF217O75362 1048 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 PRR35P0CG20 571 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 NCF1P14598 390 aaPredicted RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 TSPAN8P19075 237 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 OXTRP30559 389 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TRIM23P36406 574 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 MAPK9P45984 424 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 SLC6A12P48065 614 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CD97P48960 835 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 MRPL19P49406 292 aaKnown RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 ATP4BP51164 291 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 CCR3P51677 355 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 FOXA1P55317 472 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 HSPA14Q0VDF9 509 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 TRAF3Q13114 568 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 KLF10Q13118 480 aa8.61□□□□□ -1.03
DDB1-213ENST00000539332 BOP1Q14137 746 aaKnown RBP8.61□□□□□ -1.03
DDB1-213ENST00000539332 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms