RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CTRCQ99895 268 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 TMEM79Q9BSE2 394 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 DERL2Q9GZP9 239 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 SPATA7Q9P0W8 599 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 ZNF180Q9UJW8 692 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 PCSK5Q92824 1860 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
CHFR-216ENST00000538235 LAMA5O15230 3695 aa12.63□□□□□ -0.39
CHFR-216ENST00000538235 ACACAQ13085 2346 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 CDRT15L2A8MXV6 281 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 H3BMH7 237 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 PLD2O14939 933 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 HGSO14964 777 aaPredicted RBP12.62□□□□□ -0.39
CHFR-216ENST00000538235 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
CHFR-216ENST00000538235 SBK3P0C264 359 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 ZNF28P17035 718 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 NELFEP18615 380 aaKnown RBP12.62□□□□□ -0.39
CHFR-216ENST00000538235 MAGP20916 626 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 CCNFP41002 786 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 SLCO1A2P46721 670 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 RGS4P49798 205 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 PNLIPRP1P54315 467 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 TBPL1P62380 186 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 SP140Q13342 867 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 TRA2AQ13595 282 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHFR-216ENST00000538235 GPR19Q15760 415 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 PRAMEF17Q5VTA0 474 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 UNQ6494/PRO21346Q6UXR6 183 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 CDHR3Q6ZTQ4 885 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 SH2D5Q6ZV89 423 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 CLEC14AQ86T13 490 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 WDR36Q8NI36 951 aaKnown RBP12.62□□□□□ -0.39
CHFR-216ENST00000538235 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 FCRL4Q96PJ5 515 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 MIPEPQ99797 713 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 ACAT2Q9BWD1 397 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 NRSN2Q9GZP1 204 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 ATG10Q9H0Y0 220 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 SPNS1Q9H2V7 528 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 POLR1BQ9H9Y6 1135 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 BTRCQ9Y297 605 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 B3GALT1Q9Y5Z6 326 aa12.62□□□□□ -0.39
CHFR-216ENST00000538235 A0A096LPK6 155 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 TEX51A0A1B0GUA7 166 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 C2orf74A8MZ97 194 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 ISM1B1AKI9 464 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 TAPBPO15533 448 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 PRAMEF4O60810 478 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 CTSVO60911 334 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 RASSF9O75901 435 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
CHFR-216ENST00000538235 TNFSF15O95150 251 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 GUCA1CO95843 209 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 C8GP07360 202 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 INHBAP08476 426 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 MTHFD2P13995 350 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 CDH3P22223 829 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 MSH2P43246 934 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 GLRBP48167 497 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 SERPINB8P50452 374 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 MAPK10P53779 464 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 SRSF6Q13247 344 aaKnown RBP12.61□□□□□ -0.39
CHFR-216ENST00000538235 SLC5A12Q1EHB4 618 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 PRAMEF9Q5VWM5 478 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 ISCA2Q86U28 154 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 FBXO39Q8N4B4 442 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 MREGQ8N565 214 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 NKAPQ8N5F7 415 aaKnown RBP12.61□□□□□ -0.39
CHFR-216ENST00000538235 C19orf47Q8N9M1 422 aaKnown RBP12.61□□□□□ -0.39
CHFR-216ENST00000538235 OR2L3Q8NG85 312 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 ESAMQ96AP7 390 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 FOPNLQ96NB1 174 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 SLC46A1Q96NT5 459 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 DPYSL5Q9BPU6 564 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 ALG9Q9H6U8 611 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 PARVBQ9HBI1 364 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 TAC3Q9UHF0 121 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 CFAP47Q6ZTR5 3102 aa12.61□□□□□ -0.39
CHFR-216ENST00000538235 A0A0J9YY10 115 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 LRRC14BA6NHZ5 514 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 SMIM23A6NLE4 172 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 SLC16A5O15375 505 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 MED26O95402 600 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 RPN2P04844 631 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 NUDT17P0C025 328 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 EPORP19235 508 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 TFEBP19484 476 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 OAS2P29728 719 aaKnown RBP12.6□□□□□ -0.39
CHFR-216ENST00000538235 GRIA3P42263 894 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms