RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TPRKBQ9Y3C4 175 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ZNF175Q9Y473 711 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 SLC16A6O15403 523 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PLOD3O60568 738 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PAPSS2O95340 614 aaPredicted RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 CFDP00746 253 aaPredicted RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 PSAPP07602 524 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 NR3C2P08235 984 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 SERPINF2P08697 491 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 TRAPPC2P0DI81 140 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 TRAPPC2BP0DI82 140 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 CHMP24386 653 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 SSTR2P30874 369 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 RPS5P46782 204 aaKnown RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 DAPP51397 102 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 MRPL28Q13084 256 aaKnown RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 ZNF273Q14593 569 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 RPS6KA2Q15349 733 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.74
RTN3-208ENST00000537981 ZNF699Q32M78 642 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 FAM98BQ52LJ0 330 aaKnown RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 TIGD7Q6NT04 549 aaPredicted RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 FAM180BQ6P0A1 224 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 DENND1CQ8IV53 801 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 RDH10Q8IZV5 341 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 CERS5Q8N5B7 392 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 TWIST2Q8WVJ9 160 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ISG20Q96AZ6 181 aaKnown RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 SLC47A1Q96FL8 570 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 CRELD1Q96HD1 420 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 FOPNLQ96NB1 174 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 LPIN3Q9BQK8 851 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ZNF670Q9BS34 389 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ELOVL6Q9H5J4 265 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ACTR8Q9H981 624 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 SDR39U1Q9NRG7 319 aaPredicted RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 KCTD5Q9NXV2 234 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 GTF2IRD1Q9UHL9 959 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 C3orf18Q9UK00 162 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 HRH3Q9Y5N1 445 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 A0A087WZ62 844 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 WASHC1A8K0Z3 465 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 ZNF487B1APH4 448 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 E9PAM4 449 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 PTP4A3O75365 173 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 VIPP01282 170 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 GLAP06280 429 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 STMN1P16949 149 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 IGFBP5P24593 272 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 HTR1EP28566 365 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 HOXA9P31269 272 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 PPP3CCP48454 512 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 CLCNKAP51800 687 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 LIMK1P53667 647 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 NFKB2Q00653 900 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 PIN1Q13526 163 aaPredicted RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 CDH18Q13634 790 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 MAD2L1BPQ15013 274 aaPredicted RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 UGP2Q16851 508 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 HKDC1Q2TB90 917 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 CARD16Q5EG05 197 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 ZC3H12BQ5HYM0 836 aaKnown RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 CELF3Q5SZQ8 465 aaKnown RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 MAP1SQ66K74 1059 aaPredicted RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 CDC42EP5Q6NZY7 148 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 GPAT4Q86UL3 456 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 C10orf111Q8N326 155 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 DCBLD1Q8N8Z6 715 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 ST13P5Q8NFI4 369 aaPredicted RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 OR11H4Q8NGC9 324 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 OR8K3Q8NH51 312 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 SLC22A8Q8TCC7 542 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 PPP1R2P1Q96PQ5 205 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 CCDC32Q9BV29 185 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 TTLL2Q9BWV7 592 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 SRRQ9GZT4 340 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 LHX5Q9H2C1 402 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 SPNS1Q9H2V7 528 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 ASB7Q9H672 318 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 ALG9Q9H6U8 611 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 HEXA-AS1Q9H8Q6 139 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 IFT46Q9NQC8 304 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 DNAJB9Q9UBS3 223 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 VPS9D1Q9Y2B5 631 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 COL1A2P08123 1366 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 CSF3P09919 207 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 PAMP19021 973 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 CCT3P49368 545 aaKnown RBP10.43□□□□□ -0.74
RTN3-208ENST00000537981 DGKQP52824 942 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 VEPH1Q14D04 833 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 UNC50Q53HI1 259 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 SAXO2Q658L1 398 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 CCDC149Q6ZUS6 474 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 TRILQ7L0X0 811 aa10.43□□□□□ -0.74
RTN3-208ENST00000537981 SLC26A9Q7LBE3 791 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms