RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 COPS8Q99627 209 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 FUNDC2Q9BWH2 189 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 VNN3Q9NY84 501 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 BAG5Q9UL15 447 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 SNX6Q9UNH7 406 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 KCNE1BA0A087WTH5 132 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 J3QRK9 145 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 BNIP3LO60238 219 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 NR4A1P22736 598 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 RAD23AP54725 363 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 HSPA14Q0VDF9 509 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 SLC14A1Q13336 389 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 ATP13A5Q4VNC0 1218 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 GALNT18Q6P9A2 607 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 DOK6Q6PKX4 331 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 RFLNAQ6ZTI6 216 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 LRRC70Q7Z2Q7 622 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 ZNF551Q7Z340 670 aaPredicted RBP13.95□□□□□ -0.18
USP44-203ENST00000537435 ZDHHC21Q8IVQ6 265 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 HOMEZQ8IX15 550 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 RAET1EQ8TD07 263 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 PYCR2Q96C36 320 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 FBXL8Q96CD0 374 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 CCDC90BQ9GZT6 254 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 PAK1IP1Q9NWT1 392 aaPredicted RBP13.95□□□□□ -0.18
USP44-203ENST00000537435 ORC6Q9Y5N6 252 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 RFXANKO14593 260 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 BCKDKO14874 412 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 SLC16A6O15403 523 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
USP44-203ENST00000537435 HTR1BP28222 390 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 MLLT10P55197 1068 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 AQP6Q13520 282 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 RFX4Q33E94 735 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 GGTA1PQ4G0N0 100 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 CDKL4Q5MAI5 379 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 TPRG1Q6ZUI0 275 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 SLC15A4Q8N697 577 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 OR2AP1Q8NGE2 309 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 CNIH3Q8TBE1 160 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 APOLD1Q96LR9 279 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 NODALQ96S42 347 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 LYSMD1Q96S90 227 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 RAD21L1Q9H4I0 556 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 CORINQ9Y5Q5 1042 aa13.94□□□□□ -0.18
USP44-203ENST00000537435 XYLBO75191 536 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CLPXO76031 633 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 ZNF682O95780 498 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 FTH1P02794 183 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 SOD2P04179 222 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CD70P32970 193 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 RYKP34925 604 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 IL5RAQ01344 420 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 RAPSNQ13702 412 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 SPCS2Q15005 226 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 LAPTM4AQ15012 233 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 PTCHD3Q3KNS1 767 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CPZQ66K79 652 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 OR4F3Q6IEY1 312 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 NEK5Q6P3R8 708 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CRTC3Q6UUV7 619 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 GALNT5Q7Z7M9 940 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 FAM217AQ8IXS0 508 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 TESCQ96BS2 214 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CMTM7Q96FZ5 175 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 BARD1Q99728 777 aaKnown RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 SLC12A9Q9BXP2 914 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 ABCB8Q9NUT2 735 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 KLHL42Q9P2K6 505 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 MBD1Q9UIS9 605 aaPredicted RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 FBXO10Q9UK96 956 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 NAALAD2Q9Y3Q0 740 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 PIKFYVEQ9Y2I7 2098 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 ANAPC1Q9H1A4 1944 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 KRT87PA6NCN2 255 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 XPNPEP2O43895 674 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 BCAS1O75363 584 aaPredicted RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 INMTO95050 263 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 C1QCP02747 245 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 HIST1H2AGP0C0S8 130 aaPredicted RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 ZNF12P17014 697 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 ITIH1P19827 911 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 HIST1H2ADP20671 130 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 PCMT1P22061 227 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 IGFBP5P24593 272 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 MAPK1P28482 360 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 MAGEA2P43356 314 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 PTSQ03393 145 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CDK5R2Q13319 367 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 IL18R1Q13478 541 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 GTF2H3Q13889 308 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 PLEKHG6Q3KR16 790 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CARD16Q5EG05 197 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 TTC23LQ6PF05 361 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 SHQ1Q6PI26 577 aaKnown RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP44-203ENST00000537435 SLC16A12Q6ZSM3 486 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 VRK3Q8IV63 474 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 FAM9CQ8IZT9 166 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms