RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 POLEQ07864 2286 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 AGPSO00116 658 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MASP2O00187 686 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PRMT5O14744 637 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SLCO2B1O94956 709 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 DDAH2O95865 285 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 APRTP07741 180 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ETS1P14921 441 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 AOAHP28039 575 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CDC25BP30305 580 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TTPAP49638 278 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SNX1Q13596 522 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SF1Q15637 639 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TTC23LQ6PF05 361 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PRUNE1Q86TP1 453 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 LDB1Q86U70 411 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SLC13A5Q86YT5 568 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZADH2Q8N4Q0 377 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CISD2Q8N5K1 135 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CCDC89Q8N998 374 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 LMNTD1Q8N9Z9 388 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 GSDMBQ8TAX9 411 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FKBP10Q96AY3 582 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 RAB11FIP5Q9BXF6 653 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ASF1BQ9NVP2 202 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PAK5Q9P286 719 aa18.89■□□□□ 0.61
TNFRSF1B-204ENST00000536782 NUP210LQ5VU65 1888 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 RASGRF2O14827 1237 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CD3EAPO15446 510 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ALBP02768 609 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MMP11P24347 488 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 GRIA3P42263 894 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 AIMP2Q13155 320 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 NR6A1Q15406 480 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TCTE1Q5JU00 501 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PCID2Q5JVF3 399 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 YOD1Q5VVQ6 348 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FCRL6Q6DN72 434 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PTRHD1Q6GMV3 140 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FIGLAQ6QHK4 219 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 OVCH1Q7RTY7 1134 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TMEM151BQ8IW70 566 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 UBE2Q2Q8WVN8 375 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PANX3Q96QZ0 392 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 WDR54Q9H977 334 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CUTCQ9NTM9 273 aa18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MARCH4Q9P2E8 410 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF1B-204ENST00000536782 DSCR3O14972 297 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FKBP9O95302 570 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CBX6O95503 412 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ONECUT2O95948 504 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ITGAXP20702 1163 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ITGA3P26006 1051 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 LRBAP50851 2863 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 GRM7Q14831 915 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TTC29Q8NA56 475 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZUFSPQ96AP4 578 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 RAD51AP1Q96B01 352 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SELENOSQ9BQE4 189 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 DIDO1Q9BTC0 2240 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SLC26A1Q9H2B4 701 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 GNPTGQ9UJJ9 305 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CDC23Q9UJX2 597 aa18.87■□□□□ 0.61
TNFRSF1B-204ENST00000536782 KPNA5O15131 536 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 NKG7Q16617 165 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 Q6ZS92 163 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 RAB42Q8N4Z0 105 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SKA2Q8WVK7 121 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 P2RY12Q9H244 342 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZBTB20Q9HC78 741 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SLC6A20Q9NP91 592 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ENAMQ9NRM1 1142 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FBXL4Q9UKA2 621 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TTC7AQ9ULT0 858 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MRFAP1Q9Y605 127 aa18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 COPG1Q9Y678 874 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SVILO95425 2214 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 A1L4Q6 167 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TARM1B6A8C7 271 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PRICKLE3O43900 615 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 NDUFS3O75489 264 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MCM3P25205 808 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 RPL22P35268 128 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 GLRBP48167 497 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SESN2P58004 480 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FAM214AQ32MH5 1076 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PRAMEF13Q5VWM6 474 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 OTOAQ7RTW8 1153 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 LRRC6Q86X45 466 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MPP5Q8N3R9 675 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 INPP5DQ92835 1189 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZNF285Q96NJ3 590 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SPSB2Q99619 263 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TSGA10Q9BZW7 698 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 IL22Q9GZX6 179 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 MRM3Q9HC36 420 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 EIF2B3Q9NR50 452 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 TREX1Q9NSU2 369 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms