RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 LEF1Q9UJU2 399 aaPredicted RBP17.75■□□□□ 0.43
HTATSF1-204ENST00000535601 FADS3Q9Y5Q0 445 aa17.75■□□□□ 0.43
HTATSF1-204ENST00000535601 NPC1O15118 1278 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 ETHE1O95571 254 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PHC1P78364 1004 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 ELP6Q0PNE2 266 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 DOC2AQ14183 400 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 ADGRE1Q14246 886 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 EIF4HQ15056 248 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 MTX3Q5HYI7 312 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 ATAT1Q5SQI0 421 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 CATSPEREQ5SY80 951 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PHACTR4Q8IZ21 702 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PPP3R2Q96LZ3 170 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 DPY30Q9C005 99 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 GID8Q9NWU2 228 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 EPS15L1Q9UBC2 864 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 DTNAQ9Y4J8 743 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 AP4S1Q9Y587 144 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PRSS51A0A1B0GVH4 220 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 KANSL1LA0AUZ9 987 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 SAP18O00422 153 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 ARPC2O15144 300 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 RNASEH1O60930 286 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PSIP1O75475 530 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 KRT6AP02538 564 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 GBAP04062 536 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 KRT6BP04259 564 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 KRT6CP48668 564 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 DUS1LQ6P1R4 473 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 DLEU7Q6UYE1 221 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 LRRC70Q7Z2Q7 622 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 FAM124AQ86V42 546 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 MINDY1Q8N5J2 469 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 GPR156Q8NFN8 814 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 TIFAQ96CG3 184 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PPP1R16AQ96I34 528 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 TBCDQ9BTW9 1192 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PFDN4Q9NQP4 134 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 BATF3Q9NR55 127 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 C1orf109Q9NX04 203 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 EIF3LQ9Y262 564 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 MUC3AQ02505 3323 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 AP2A2O94973 939 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PGS1Q32NB8 556 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 HACD2Q6Y1H2 254 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 HDDC3Q8N4P3 179 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 NEIL2Q969S2 332 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 KCTD14Q9BQ13 255 aaPredicted RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 ABCD2Q9UBJ2 740 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 LRCH1Q9Y2L9 728 aa17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 TDRKHQ9Y2W6 561 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 SNRNP200O75643 2136 aaKnown RBP17.74■□□□□ 0.43
HTATSF1-204ENST00000535601 PCNAP12004 261 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 CKMT2P17540 419 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 NAA20P61599 178 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 KIAA0040Q15053 153 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 CAPRIN2Q6IMN6 1127 aaKnown RBP17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 TRIM46Q7Z4K8 759 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 TMPRSS11BQ86T26 416 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 C10orf111Q8N326 155 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 ZNF480Q8WV37 535 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 WSCD2Q2TBF2 565 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 AGBL4Q5VU57 503 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 HMBOX1Q6NT76 420 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 OR5AR1Q8NGP9 310 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 SEPHS2Q99611 448 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 CIB1Q99828 191 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 HOPXQ9BPY8 73 aaPredicted RBP17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 TRMT61BQ9BVS5 477 aaKnown RBP17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 NEUROG3Q9Y4Z2 214 aa17.73■□□□□ 0.43
HTATSF1-204ENST00000535601 MYOCOSA0A1B0GUC4 107 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 SLC28A1O00337 649 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 CATP04040 527 aaKnown RBP17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 ENO2P09104 434 aaPredicted RBP17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 RHDQ02161 417 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 FGL2Q14314 439 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 CST6Q15828 149 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 FRG2Q64ET8 278 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 TMEM102Q8N9M5 508 aaPredicted RBP17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 FRG2BQ96QU4 278 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 INPP5KQ9BT40 448 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 SPNS1Q9H2V7 528 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 TRPV4Q9HBA0 871 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 MRGBPQ9NV56 204 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 DZANK1Q9NVP4 752 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 HEATR5BQ9P2D3 2071 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 C1QTNF3-AMACRE9PGA6 284 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 KPNA5O15131 536 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 APODP05090 189 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 HNMTP50135 292 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 TBPL1P62380 186 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 INPP5AQ14642 412 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 ITPRIPL2Q3MIP1 535 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 USP39Q53GS9 565 aaKnown RBP17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 OGFRL1Q5TC84 451 aaPredicted RBP17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 TMEM154Q6P9G4 183 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 NLRP8Q86W28 1048 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 NRSN1Q8IZ57 195 aa17.72■□□□□ 0.43
HTATSF1-204ENST00000535601 ZNF740Q8NDX6 193 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms