RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FAM90A26D6RGX4 464 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FAM72CH0Y354 149 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 H7C0S8 307 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 MAP2K7O14733 419 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CAPN9O14815 690 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 PRKAB2O43741 272 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 LMX1BO60663 402 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 RTN2O75298 545 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TBCAO75347 108 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 CRYAAP02489 173 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SPARCP09486 303 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FAM200BP0CF97 657 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CTAGE8P0CG41 777 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 IL7RP16871 459 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 POLR2CP19387 275 aaPredicted RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 PSMA3P25788 255 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 MARK3P27448 753 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 ARL3P36405 182 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 PBX3P40426 434 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 APOBEC1P41238 236 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 PRCPP42785 496 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TDO2P48775 406 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FMO5P49326 533 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 RPS3AP61247 264 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 PHEXP78562 749 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SREBF2Q12772 1141 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FRG1Q14331 258 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 WTAPQ15007 396 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 RBBP5Q15291 538 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 CCL15Q16663 113 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 DNAJC21Q5F1R6 531 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 FAM72AQ5TYM5 149 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 C18orf63Q68DL7 685 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FAM72DQ6L9T8 149 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TATDN1Q6P1N9 297 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 C19orf48Q6RUI8 117 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SARM1Q6SZW1 724 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CASC1Q6TDU7 716 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CYP20A1Q6UW02 462 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 DSG4Q86SJ6 1040 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TSPAN33Q86UF1 283 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FAM72BQ86X60 149 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CTAGE4Q8IX94 777 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CCDC13Q8IYE1 715 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 ADSSL1Q8N142 457 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FRMD1Q8N878 549 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 ARL10Q8N8L6 244 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 OR14L1PQ8NHC6 308 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 GOLGA5Q8TBA6 731 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TRPC4APQ8TEL6 797 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SDR42E1Q8WUS8 393 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 ARHGEF2Q92974 986 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 EXOC4Q96A65 974 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SCRN2Q96FV2 425 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CNDP2Q96KP4 475 aaKnown RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 TXLNGYQ9BZA5 131 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 GHITMQ9H3K2 345 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 MUC13Q9H3R2 512 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 LRRC4Q9HBW1 653 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SDF2L1Q9HCN8 221 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 RANGRFQ9HD47 186 aaPredicted RBP3.31□□□□□ -1.88
USP48-215ENST00000534705 ECHDC1Q9NTX5 307 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 ZFP57Q9NU63 452 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 HCFC1R1Q9NWW0 138 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 EHD2Q9NZN4 543 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 STK39Q9UEW8 545 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TBC1D29Q9UFV1 150 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 OR14J1Q9UGF5 321 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 FBXL2Q9UKC9 423 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 TMEM5Q9Y2B1 443 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 OR2W1Q9Y3N9 320 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 CLIC4Q9Y696 253 aa3.31□□□□□ -1.88
USP48-215ENST00000534705 SIP14410 1827 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 ELP1O95163 1332 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 ZCWPW2A0A1B0GU75 182 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 A0A1W2PP11 408 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 TRIM64A6NGJ6 449 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 TRIM64BA6NI03 449 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 LIPT2A6NK58 231 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 AP3D1O14617 1153 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 CXCL11O14625 94 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 ANKRD28O15084 1053 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 RNF113AO15541 343 aaKnown RBP3.3□□□□□ -1.88
USP48-215ENST00000534705 ZNHIT1O43257 154 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 BUD23O43709 281 aaKnown RBP3.3□□□□□ -1.88
USP48-215ENST00000534705 BAG3O95817 575 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 ATP1A1P05023 1023 aaKnown RBP3.3□□□□□ -1.88
USP48-215ENST00000534705 EIF2S1P05198 315 aaKnown RBP3.3□□□□□ -1.88
USP48-215ENST00000534705 PNMA6AP0CW24 399 aaPredicted RBP3.3□□□□□ -1.88
USP48-215ENST00000534705 ACADMP11310 421 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 LAMP2P13473 410 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 ATP6V1B1P15313 513 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 MX1P20591 662 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 GLIPR1P48060 266 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 CD151P48509 253 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 CLDN20P56880 219 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 SNX16P57768 344 aa3.3□□□□□ -1.88
USP48-215ENST00000534705 TAS2R40P59535 323 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms