RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TSR3Q9UJK0 312 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 RUVBL2Q9Y230 463 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 VPS9D1Q9Y2B5 631 aa14.85□□□□□ -0.03
CPSF1-211ENST00000533492 PTRH2Q9Y3E5 179 aaKnown RBP14.85□□□□□ -0.03
CPSF1-211ENST00000533492 NBASA2RRP1 2371 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 CTAGE9A4FU28 777 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 A6NL46 340 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 GOLGA8MH3BSY2 632 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 PEX12O00623 359 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 NIPSNAP2O75323 286 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 KLF7O75840 302 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-211ENST00000533492 FKBP9O95302 570 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 MLNP12872 115 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 ADARP55265 1226 aaKnown RBP14.84□□□□□ -0.03
CPSF1-211ENST00000533492 THOC5Q13769 683 aaKnown RBP14.84□□□□□ -0.03
CPSF1-211ENST00000533492 SLC9A5Q14940 896 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 NKAIN1Q4KMZ8 207 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 ANKRD22Q5VYY1 191 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 MCUQ8NE86 351 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 ZNF669Q96BR6 464 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-211ENST00000533492 XAB2Q9HCS7 855 aaKnown RBP14.84□□□□□ -0.03
CPSF1-211ENST00000533492 ZNF451Q9Y4E5 1061 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 PCDHGB7Q9Y5F8 929 aa14.84□□□□□ -0.03
CPSF1-211ENST00000533492 TNRC6AQ8NDV7 1962 aaKnown RBP14.84□□□□□ -0.03
CPSF1-211ENST00000533492 CCDC88CQ9P219 2028 aa14.83□□□□□ -0.03
CPSF1-211ENST00000533492 FAM237BA0A1B0GVD1 139 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 TTLL8A6PVC2 850 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 TARM1B6A8C7 271 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 PGRMC1O00264 195 aaKnown RBP14.83□□□□□ -0.04
CPSF1-211ENST00000533492 PIM1P11309 404 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-211ENST00000533492 PKMP14618 531 aaKnown RBP14.83□□□□□ -0.04
CPSF1-211ENST00000533492 MLLT10P55197 1068 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 ATP1A4Q13733 1029 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 GRM7Q14831 915 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 CCSMST1Q4G0I0 132 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 ANKRD20A4Q4UJ75 823 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 TCTE1Q5JU00 501 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 FCRL6Q6DN72 434 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 TTLL10Q6ZVT0 673 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 ATCAYQ86WG3 371 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 CILP2Q8IUL8 1156 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 FDCSPQ8NFU4 85 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 GRK7Q8WTQ7 553 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 PTERQ96BW5 349 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 FER1L6-AS2Q96M78 137 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 CCDC68Q9H2F9 335 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 MLXIPLQ9NP71 852 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 INTS10Q9NVR2 710 aaKnown RBP14.83□□□□□ -0.04
CPSF1-211ENST00000533492 PLAAQ9Y263 795 aa14.83□□□□□ -0.04
CPSF1-211ENST00000533492 FER1L5A0AVI2 2057 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 GOLGA6L10A0A0M3HER8 536 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 ZSCAN12O43309 604 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 PRICKLE3O43900 615 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-211ENST00000533492 CEACAM4O75871 244 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 MATN4O95460 622 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 IGHEP01854 428 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 ATP5DP30049 168 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 CYP1B1Q16678 543 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 KLHL38Q2WGJ6 581 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 TTLL9Q3SXZ7 439 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 YOD1Q5VVQ6 348 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-211ENST00000533492 PAPD7Q5XG87 772 aaKnown RBP14.82□□□□□ -0.04
CPSF1-211ENST00000533492 ZNF470Q6ECI4 717 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 CENPUQ71F23 418 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 SLC35F6Q8N357 371 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 EFCAB3Q8N7B9 438 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 TTC29Q8NA56 475 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-211ENST00000533492 OR2Y1Q8NGV0 311 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 HMGCLL1Q8TB92 370 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 SERPINB12Q96P63 405 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 MIPEPQ99797 713 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 TRIM56Q9BRZ2 755 aaKnown RBP14.82□□□□□ -0.04
CPSF1-211ENST00000533492 FAM114A2Q9NRY5 505 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 GPR83Q9NYM4 423 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 IL1RAPL1Q9NZN1 696 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 SPATA7Q9P0W8 599 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 MAD1L1Q9Y6D9 718 aa14.82□□□□□ -0.04
CPSF1-211ENST00000533492 UBR5O95071 2799 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-211ENST00000533492 A0A1B0GX78 115 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 KRT87PA6NCN2 255 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 SRPX2O60687 465 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-211ENST00000533492 DPM1O60762 260 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 PSMB5P28074 263 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 CMPK1P30085 196 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 CTBP1Q13363 440 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 TSTA3Q13630 321 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-211ENST00000533492 FAM214AQ32MH5 1076 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 ACSBG2Q5FVE4 666 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 MRPL14Q6P1L8 145 aaKnown RBP14.81□□□□□ -0.04
CPSF1-211ENST00000533492 MRGPREQ86SM8 312 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 CLEC1AQ8NC01 280 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 OR2L3Q8NG85 312 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 OR9A1PQ8NGU1 263 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 COG1Q8WTW3 980 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 OSBPL9Q96SU4 736 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 NUDT9Q9BW91 350 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 CUTCQ9NTM9 273 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 GALPQ9UBC7 116 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 FAM169AQ9Y6X4 670 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms