RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 TADA2AO75478 443 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ITGA10O75578 1167 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 RPS6KA4O75676 772 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SURF6O75683 361 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 UGT2B17O75795 530 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 HEXIM1O94992 359 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 OAZ2O95190 189 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 H6PDO95479 791 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 HSPA4LO95757 839 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ATP1A1P05023 1023 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 ZDHHC11BP0C7U3 371 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 COX5BP10606 129 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PF4V1P10720 104 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 MLNP12872 115 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SLC2A4P14672 509 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ZNF30P17039 623 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ZNF8P17098 575 aaPredicted RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 ZP3P21754 424 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 EDNRBP24530 442 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 IL1R2P27930 398 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PSMA5P28066 241 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 EPHB2P29323 1055 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CRABP1P29762 137 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CCND2P30279 289 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ADRA1BP35368 520 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ATP5C1P36542 298 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 CHRNA7P36544 502 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CASP3P42574 277 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 IL12RB1P42701 662 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ACAA2P42765 397 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 RPS5P46782 204 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 OR1G1P47890 313 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SLC6A9P48067 706 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CPT1AP50416 773 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CLCNKBP51801 687 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ITGA8P53708 1063 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ATXN1P54253 815 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 HSPA2P54652 639 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 AK2P54819 239 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 UGT2B15P54855 530 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 GMFBP60983 142 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 COPZ1P61923 177 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 PPATQ06203 517 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 GAGE1Q13065 139 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 DGCR6Q14129 220 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 MTF1Q14872 753 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 NFIXQ14938 502 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PON2Q15165 354 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 LLGL1Q15334 1064 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SURF1Q15526 300 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 STXBP2Q15833 593 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 UAP1Q16222 522 aaPredicted RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 PSMD5Q16401 504 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PDK4Q16654 411 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 TIGD6Q17RP2 521 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 DEFB115Q30KQ5 88 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 C3orf36Q3SXR2 165 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CHRFAM7AQ494W8 412 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 RNF212Q495C1 297 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ZFP69Q49AA0 526 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 HSD17B12Q53GQ0 312 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 FSCBQ5H9T9 825 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 NOMO2Q5JPE7 1267 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 TMEM240Q5SV17 173 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 KRT39Q6A163 491 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ANKRD26P1Q6NSI1 321 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 HMBOX1Q6NT76 420 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SLC36A4Q6YBV0 504 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PGAP1Q75T13 922 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 TPRA1Q86W33 373 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ZDHHC17Q8IUH5 632 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 MCOLN2Q8IZK6 566 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ABRAQ8N0Z2 381 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ZNF321PQ8N8H1 164 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 GPR156Q8NFN8 814 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 OR52H1Q8NGJ2 320 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 OR9A1PQ8NGU1 263 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 OR6B3Q8NGW1 331 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 POC1BQ8TC44 478 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ZFAND1Q8TCF1 268 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 ADAMTS18Q8TE60 1221 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 RAB2BQ8WUD1 216 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 CASKIN2Q8WXE0 1202 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SNX19Q92543 992 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PIGKQ92643 395 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 SYN2Q92777 582 aaPredicted RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 FUBP1Q96AE4 644 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 TCEAL4Q96EI5 215 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PGAP3Q96FM1 320 aaPredicted RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 MRPL48Q96GC5 212 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 NSL1Q96IY1 281 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 PIWIL1Q96J94 861 aaKnown RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 RNF145Q96MT1 663 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 FOPNLQ96NB1 174 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 KLHL5Q96PQ7 755 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 LENG8Q96PV6 779 aaPredicted RBP5.38□□□□□ -1.55
CD44-236ENST00000533222 DMRTA2Q96SC8 542 aa5.38□□□□□ -1.55
CD44-236ENST00000533222 RBM15Q96T37 977 aaKnown RBP eCLIP5.38□□□□□ -1.55
CD44-236ENST00000533222 C19orf43Q9BQ61 176 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms