RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 STK17BO94768 372 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 DLGAP3O95886 979 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 MAP4P27816 1152 aaKnown RBP19.15■□□□□ 0.66
CPSF1-209ENST00000532725 STX2P32856 288 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 HSD17B2P37059 387 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 SF1Q15637 639 aaKnown RBP19.15■□□□□ 0.66
CPSF1-209ENST00000532725 PWWP2BQ6NUJ5 590 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 CDHR3Q6ZTQ4 885 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 CEP97Q8IW35 865 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 C19orf47Q8N9M1 422 aaKnown RBP19.15■□□□□ 0.66
CPSF1-209ENST00000532725 OR2A1Q8NGT9 310 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 LINGO1Q96FE5 620 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 FMO2Q99518 471 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 NINJ2Q9NZG7 142 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 PDE10AQ9Y233 779 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 PTPRQQ9UMZ3 2332 aa19.15■□□□□ 0.66
CPSF1-209ENST00000532725 MAP3K7O43318 606 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 ZNF500O60304 480 aaPredicted RBP19.14■□□□□ 0.65
CPSF1-209ENST00000532725 TIAF1O95411 115 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 SLC16A8O95907 504 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 C8GP07360 202 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 RHOXF2BP0C7M4 288 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 SPTBP11277 2137 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 SAT1P21673 171 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 OAS2P29728 719 aaKnown RBP19.14■□□□□ 0.65
CPSF1-209ENST00000532725 GP5P40197 560 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 GABRA4P48169 554 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 POU4F1Q01851 419 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 UBAP2Q5T6F2 1119 aaKnown RBP19.14■□□□□ 0.65
CPSF1-209ENST00000532725 GRTP1Q5TC63 336 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 CTAGE3PQ8IX95 158 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 IFT20Q8IY31 132 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 LRRC56Q8IYG6 542 aaPredicted RBP19.14■□□□□ 0.65
CPSF1-209ENST00000532725 MYO1HQ8N1T3 1032 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 DNAJC22Q8N4W6 341 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 PPM1NQ8N819 430 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 OR8K5Q8NH50 307 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 MCOLN3Q8TDD5 553 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 ZNF480Q8WV37 535 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 RBBP8Q99708 897 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 RHOXF2Q9BQY4 288 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 ULBP3Q9BZM4 244 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 PARVBQ9HBI1 364 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 KLHL20Q9Y2M5 609 aa19.14■□□□□ 0.65
CPSF1-209ENST00000532725 E7ENX8 843 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 HCRTR1O43613 425 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 RAD1O60671 282 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 FAM155BO75949 473 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 FKBP9O95302 570 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 PNLIPRP1P54315 467 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 TAP2Q03519 686 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 SP140Q13342 867 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 COL28A1Q2UY09 1125 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 KIAA1614Q5VZ46 1190 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 SMPDL3AQ92484 453 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 ZUFSPQ96AP4 578 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 CCNL2Q96S94 520 aaPredicted RBP19.13■□□□□ 0.65
CPSF1-209ENST00000532725 GPR22Q99680 433 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 FUT8Q9BYC5 575 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.13■□□□□ 0.65
CPSF1-209ENST00000532725 TXNDC16Q9P2K2 825 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 NFU1Q9UMS0 254 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 ADAMTS20P59510 1910 aa19.13■□□□□ 0.65
CPSF1-209ENST00000532725 SNRNP200O75643 2136 aaKnown RBP19.13■□□□□ 0.65
CPSF1-209ENST00000532725 TEX51A0A1B0GUA7 166 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 KIAA0754O94854 1291 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 WISP3O95389 354 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 SYF2O95926 243 aaKnown RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 ZNF37AP17032 561 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 MAGP20916 626 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 PSMB5P28074 263 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 SPRP35270 261 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 GRIA3P42263 894 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 SRSF6Q13247 344 aaKnown RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 NAB1Q13506 487 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 MAP7Q14244 749 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 ZNF460Q14592 562 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 PHKG1Q16816 387 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 BROXQ5VW32 411 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 FCRL6Q6DN72 434 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 FIGLAQ6QHK4 219 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 SUSD1Q6UWL2 747 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 CACNA2D3Q8IZS8 1091 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 NLGN4XQ8N0W4 816 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 NKAPQ8N5F7 415 aaKnown RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 NLGN4YQ8NFZ3 816 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 OR2L3Q8NG85 312 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 OR1L3Q8NH93 324 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 ANKRD49Q8WVL7 239 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 ANKRD7Q92527 254 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 RNF31Q96EP0 1072 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 CRELD1Q96HD1 420 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 CCDC138Q96M89 665 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 CDC42EP4Q9H3Q1 356 aaKnown RBP19.12■□□□□ 0.65
CPSF1-209ENST00000532725 CAB39LQ9H9S4 337 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 POPDC3Q9HBV1 291 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 SERTAD3Q9UJW9 196 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 IKZF3Q9UKT9 509 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 KLK4Q9Y5K2 254 aa19.12■□□□□ 0.65
CPSF1-209ENST00000532725 ZNF839A8K0R7 811 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms