RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CUTCQ9NTM9 273 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 CTSFQ9UBX1 484 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 AMFRQ9UKV5 643 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 HS3ST3B1Q9Y662 390 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 CPAMD8Q8IZJ3 1885 aa17.67■□□□□ 0.42
SSSCA1-206ENST00000531405 MYO7BQ6PIF6 2116 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 HEATR9A2RTY3 570 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 DSCR3O14972 297 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 IPO7O95373 1038 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 FTCDO95954 541 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 OR1D4P47884 311 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 ARSFP54793 590 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 TSTD2Q5T7W7 516 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 FIGLAQ6QHK4 219 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 KIRREL2Q6UWL6 708 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 LDB1Q86U70 411 aaPredicted RBP17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 PARP9Q8IXQ6 854 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 ST6GALNAC3Q8NDV1 305 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 OR6P1Q8NGX9 317 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 OR4L1Q8NH43 312 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 CNDP1Q96KN2 507 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 WDR54Q9H977 334 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 AGPAT4Q9NRZ5 378 aa17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 TEP1Q99973 2627 aaKnown RBP17.66■□□□□ 0.42
SSSCA1-206ENST00000531405 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 KRT87PA6NCN2 255 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 GPC4O75487 556 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 SF1Q15637 639 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 AGAP7PQ5VUJ5 663 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 PPP1R21Q6ZMI0 780 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 PRUNE1Q86TP1 453 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 KCNMB4Q86W47 210 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 DCUN1D3Q8IWE4 304 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 UBL4BQ8N7F7 174 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 OR2L8Q8NGY9 312 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 GRHL3Q8TE85 626 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 PPP4R1Q8TF05 950 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 ASZ1Q8WWH4 475 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 AGAP4Q96P64 663 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 TTC1Q99614 292 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 SELENOSQ9BQE4 189 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 ETNK1Q9HBU6 452 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 MAU2Q9Y6X3 613 aa17.65■□□□□ 0.42
SSSCA1-206ENST00000531405 E2F3O00716 465 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 RASGRF2O14827 1237 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 NRP2O60462 931 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 MED26O95402 600 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 ONECUT2O95948 504 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 S1PR4O95977 384 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 GAS8O95995 478 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 ALBP02768 609 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 RPN2P04844 631 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 PIM1P11309 404 aaPredicted RBP17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 PSMB5P28074 263 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 GRM7Q14831 915 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 RBBP7Q16576 425 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 TUBB8Q3ZCM7 444 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 FASTKD1Q53R41 847 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 IGFL2Q6UWQ7 119 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 UNC5DQ6UXZ4 953 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 KIAA1328Q86T90 577 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 DNAJB14Q8TBM8 379 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 NACC2Q96BF6 587 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 SLC22A18Q96BI1 424 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 CARD6Q9BX69 1037 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 SLC26A1Q9H2B4 701 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 INTS7Q9NVH2 962 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 MARCH4Q9P2E8 410 aaPredicted RBP17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 SLC39A10Q9ULF5 831 aa17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 RUVBL2Q9Y230 463 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-206ENST00000531405 F8W8V4 182 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 CTSVO60911 334 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 SUN1O94901 812 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 APOA4P06727 396 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ETS1P14921 441 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ADRA1DP25100 572 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 AOAHP28039 575 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 BDKRB1P46663 353 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 VSX2P58304 361 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 PRAMEP78395 509 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ACVR1Q04771 509 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 Q0VFX4 171 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 CDC16Q13042 620 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ZNF169Q14929 603 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 CCSMST1Q4G0I0 132 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ZC3H12BQ5HYM0 836 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 IRAK1BP1Q5VVH5 260 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 TTC29Q8NA56 475 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 OR11G2Q8NGC1 345 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 DENND1AQ8TEH3 1009 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 THOC3Q96J01 351 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ZNF285Q96NJ3 590 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 TSSK1BQ9BXA7 367 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 LHPPQ9H008 270 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 MRM3Q9HC36 420 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 RIMKLBQ9ULI2 386 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 OSGIN2Q9Y236 505 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 TCAF1Q9Y4C2 921 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 NFS1Q9Y697 457 aa17.63■□□□□ 0.41
SSSCA1-206ENST00000531405 ERI2A8K979 691 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms