RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 SPATA1Q5VX52 437 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 ZNF449Q6P9G9 518 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 FASTKD5Q7L8L6 764 aaKnown RBP2.42□□□□□ -2.02
PTPN11-203ENST00000530818 PTOV1Q86YD1 416 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 DCUN1D3Q8IWE4 304 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 FAM9BQ8IZU0 186 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 CRYBG2Q8N1P7 616 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 SCML4Q8N228 414 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 ZNF843Q8N446 348 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 DMBX1Q8NFW5 382 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 LRRC8CQ8TDW0 803 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 DNAAF4Q8WXU2 420 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 SEMA4DQ92854 862 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 SENP5Q96HI0 755 aaPredicted RBP2.42□□□□□ -2.02
PTPN11-203ENST00000530818 ST6GAL2Q96JF0 529 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 ZNF582Q96NG8 517 aaPredicted RBP2.42□□□□□ -2.02
PTPN11-203ENST00000530818 COA1Q9GZY4 146 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 HRH4Q9H3N8 390 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 BICC1Q9H694 974 aaKnown RBP2.42□□□□□ -2.02
PTPN11-203ENST00000530818 NPAP1Q9NZP6 1156 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 VPS28Q9UK41 221 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 PCDHGB4Q9UN71 923 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 PTRH2Q9Y3E5 179 aaKnown RBP2.42□□□□□ -2.02
PTPN11-203ENST00000530818 FANCIQ9NVI1 1328 aa2.42□□□□□ -2.02
PTPN11-203ENST00000530818 KIAA1217Q5T5P2 1943 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 LOC102723996A0A087X1L8 192 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 A0A1W2PPI3 338 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ANKRD66B4E2M5 251 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 CTDSP2O14595 271 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 NDUFS4O43181 175 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 FGF17O60258 216 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PRKNO60260 465 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 FRAT2O75474 233 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SLC22A3O75751 556 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 BMP10O95393 424 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TSHBP01222 138 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ATP1A1P05023 1023 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 KRT19P08727 400 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ACP2P11117 423 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 CSF2RAP15509 400 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ALOX12P18054 663 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 MSH3P20585 1137 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 NF2P35240 595 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SLC15A1P46059 708 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 GLIPR1P48060 266 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 THOP1P52888 689 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TIMM10P62072 90 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PRKCZQ05513 592 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 LMOD3Q0VAK6 560 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 LRMPQ12912 555 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 GAGE5Q13069 117 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 GAGE6Q13070 117 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 DMP1Q13316 513 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 MELKQ14680 651 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 KIR2DS3Q14952 304 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 RALBP1Q15311 655 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 WDR38Q5JTN6 314 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PDSS1Q5T2R2 415 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ALS2CLQ60I27 953 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PLA2G4FQ68DD2 849 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 APOBEC3HQ6NTF7 200 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TEX38Q6PEX7 206 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 C16orf54Q6UWD8 224 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PLEKHM3Q6ZWE6 761 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SLC26A9Q7LBE3 791 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 LDB1Q86U70 411 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 APOBEC3FQ8IUX4 373 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ARID3BQ8IVW6 561 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 MCEMP1Q8IX19 187 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TEX11Q8IYF3 940 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 C17orf53Q8N3J3 647 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 C1orf52Q8N6N3 182 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 LMNTD1Q8N9Z9 388 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 POC5Q8NA72 575 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PTPMT1Q8WUK0 201 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ZFAND2BQ8WV99 257 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SMPDL3BQ92485 455 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SLC22A18Q96BI1 424 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ZNF501Q96CX3 271 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SAT2Q96F10 170 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ZNF583Q96ND8 569 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 NUDCD1Q96RS6 583 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PAFAH2Q99487 392 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 C1QTNF1Q9BXJ1 281 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PNNQ9H307 717 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TFB2MQ9H5Q4 396 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 SYNCQ9H7C4 482 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 DNAJC18Q9H819 358 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 FKRPQ9H9S5 495 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 ZNF334Q9HCZ1 680 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PDE7BQ9NP56 450 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 PTTG2Q9NZH5 202 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 LARSQ9P2J5 1176 aaKnown RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 RHCGQ9UBD6 479 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 FAF1Q9UNN5 650 aaPredicted RBP2.41□□□□□ -2.02
PTPN11-203ENST00000530818 CHD7Q9P2D1 2997 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TRANK1O15050 2925 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 TET1Q8NFU7 2136 aa2.41□□□□□ -2.02
PTPN11-203ENST00000530818 FLT1P17948 1338 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms