RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 IL17FQ96PD4 163 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 P2RY12Q9H244 342 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 LZTFL1Q9NQ48 299 aa20.08■□□□□ 0.81
SMPD1-204ENST00000530395 A0A1B0GX78 115 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 FGGP02679 453 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 CCDC175P0C221 793 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 NMBRP28336 390 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 CCNFP41002 786 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 EIF3BP55884 814 aaKnown RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 INPP5JQ15735 1006 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 TCTE1Q5JU00 501 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 RNF187Q5TA31 235 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 FHL5Q5TD97 284 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 YOD1Q5VVQ6 348 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 SLC6A19Q695T7 634 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 MRNIPQ6NTE8 343 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 TTLL10Q6ZVT0 673 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 SDCCAG8Q86SQ7 713 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 GALNT16Q8N428 558 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 RBMXL3Q8N7X1 1067 aaKnown RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 TTC29Q8NA56 475 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 FKBP10Q96AY3 582 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 SLC29A3Q9BZD2 475 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 MRM3Q9HC36 420 aaKnown RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 HOMER3Q9NSC5 361 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 P4HTMQ9NXG6 502 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 LUZP4Q9P127 313 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 MAP10Q9P2G4 905 aa20.07■□□□□ 0.8
SMPD1-204ENST00000530395 TTC7AQ9ULT0 858 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-204ENST00000530395 ESPL1Q14674 2120 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 TPSB2P20231 275 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 CDK16Q00536 496 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 GRM7Q14831 915 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 MYBPC3Q14896 1274 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 TPSAB1Q15661 275 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 FIGLAQ6QHK4 219 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 LMNTD1Q8N9Z9 388 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 MAGEC3Q8TD91 643 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 SELENOSQ9BQE4 189 aa20.06■□□□□ 0.8
SMPD1-204ENST00000530395 DSCR3O14972 297 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 CNOT3O75175 753 aaKnown RBP20.05■□□□□ 0.8
SMPD1-204ENST00000530395 IPO13O94829 963 aaKnown RBP20.05■□□□□ 0.8
SMPD1-204ENST00000530395 AGFG2O95081 481 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 VAPBO95292 243 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 C1orf105O95561 183 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 MGAT1P26572 445 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 BDKRB1P46663 353 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 GCGRP47871 477 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 FCRL6Q6DN72 434 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 LRRC8BQ6P9F7 803 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 ZNF662Q6ZS27 426 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 PPP1R32Q7Z5V6 425 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 Q8NA96 180 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 TRIM58Q8NG06 486 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 TM9SF4Q92544 642 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 ZUFSPQ96AP4 578 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 NACC2Q96BF6 587 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 KIFC1Q9BW19 673 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 WDR54Q9H977 334 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 LRRC4CQ9HCJ2 640 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 CUTCQ9NTM9 273 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 SYBUQ9NX95 663 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 FAM169AQ9Y6X4 670 aa20.05■□□□□ 0.8
SMPD1-204ENST00000530395 NBPF19A0A087WUL8 3843 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 BLACEA4D250 179 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 TARM1B6A8C7 271 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 H3BMM5 538 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 CEP104O60308 925 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 ALBP02768 609 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 UMODP07911 640 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 GRIA3P42263 894 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 KCNJ1P48048 391 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 SARNPP82979 210 aaKnown RBP20.04■□□□□ 0.8
SMPD1-204ENST00000530395 PRR30Q53SZ7 412 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-204ENST00000530395 CNSTQ6PJW8 725 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 HMGCLL1Q8TB92 370 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 MFSD3Q96ES6 412 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 PSMG3-AS1Q96PY0 264 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 TCF12Q99081 682 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 ATP13A2Q9NQ11 1180 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 SPATA7Q9P0W8 599 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 SOX13Q9UN79 622 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 NFS1Q9Y697 457 aa20.04■□□□□ 0.8
SMPD1-204ENST00000530395 AGPSO00116 658 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 PAMP19021 973 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 NAA25Q14CX7 972 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 TYSND1Q2T9J0 566 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 FAM214AQ32MH5 1076 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 CTSL3PQ5NE16 218 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 ARMC3Q5W041 872 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 OVCH1Q7RTY7 1134 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 IQCKQ8N0W5 287 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 LPGAT1Q92604 370 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 SLC22A11Q9NSA0 550 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 IL1RAPL1Q9NZN1 696 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 CDC23Q9UJX2 597 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 NXT1Q9UKK6 140 aaKnown RBP20.03■□□□□ 0.8
SMPD1-204ENST00000530395 RUVBL2Q9Y230 463 aaKnown RBP20.03■□□□□ 0.8
SMPD1-204ENST00000530395 B3GNT3Q9Y2A9 372 aa20.03■□□□□ 0.8
SMPD1-204ENST00000530395 PRICKLE3O43900 615 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms