RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 HM13Q8TCT9 377 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 MAGOHBQ96A72 148 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SNRNP40Q96DI7 357 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ARSGQ96EG1 525 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 C9orf72Q96LT7 481 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 BARD1Q99728 777 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 KRTAP4-12Q9BQ66 201 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 CCM2Q9BSQ5 444 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 RAB33BQ9H082 229 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 OR52A5Q9H2C5 316 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 YY1AP1Q9H869 796 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 COG4Q9H9E3 785 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 CHST11Q9NPF2 352 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 TREX1Q9NSU2 369 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 IMP3Q9NV31 184 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 ASF1BQ9NVP2 202 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 AKAP7Q9P0M2 348 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 LUZP4Q9P127 313 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SEMA5BQ9P283 1151 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 FAM8A1Q9UBU6 413 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 EPHA6Q9UF33 1036 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 KLHL3Q9UH77 587 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 SNX12Q9UMY4 172 aa8.21□□□□□ -1.1
SSBP3-212ENST00000528930 CFAP20Q9Y6A4 193 aaKnown RBP8.21□□□□□ -1.1
SSBP3-212ENST00000528930 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PGRMC1O00264 195 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CES2O00748 559 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 TOX3O15405 576 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 KIF1CO43896 1103 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 KIF5CO60282 957 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 OR1I1O60431 355 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PHF2O75151 1096 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 AVILO75366 819 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 DNAJB5O75953 348 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 KRT14P02533 472 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 FAM157BP0CG42 384 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 AMD1P17707 334 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ALAS2P22557 587 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 MGAT1P26572 445 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 MAP4P27816 1152 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 NMBRP28336 390 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CD151P48509 253 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PPM1FP49593 454 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 VPS41P49754 854 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ITGA1P56199 1179 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PPP1CAP62136 330 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CDK16Q00536 496 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 MC2RQ01718 297 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 GPS1Q13098 491 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ELOAQ14241 798 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF630Q2M218 657 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ANKRD22Q5VYY1 191 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ANKS6Q68DC2 871 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 SLC6A19Q695T7 634 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CCDC137Q6PK04 289 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 AFTPHQ6ULP2 937 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 BNC2Q6ZN30 1099 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CAND1Q86VP6 1230 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 UNC5BQ8IZJ1 945 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PPHLN1Q8NEY8 458 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 OR6P1Q8NGX9 317 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ZFPM2Q8WW38 1151 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 KLHL6Q8WZ60 621 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CPT1BQ92523 772 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 ART4Q93070 314 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PNPLA2Q96AD5 504 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 C12orf66Q96MD2 445 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 KIFC1Q9BW19 673 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 TRIM55Q9BYV6 548 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 L2HGDHQ9H9P8 463 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 APMAPQ9HDC9 416 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 SLAMF7Q9NQ25 335 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 FBXO8Q9NRD0 319 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 SYBUQ9NX95 663 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 SIDT1Q9NXL6 827 aaKnown RBP8.2□□□□□ -1.1
SSBP3-212ENST00000528930 BFARQ9NZS9 450 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 SLC24A2Q9UI40 661 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 PYCARDQ9ULZ3 195 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 CUBNO60494 3623 aa8.2□□□□□ -1.1
SSBP3-212ENST00000528930 SLC5A10A0PJK1 596 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 OR5K3A6NET4 321 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 M0R082 166 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 AP3B1O00203 1094 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 TMEM63AO94886 807 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 GSTM1P09488 218 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 SLC35G4P0C7Q5 338 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 ARNTP27540 789 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 PREPP48147 710 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 PRAMEP78395 509 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 GSTM4Q03013 218 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 RPA4Q13156 261 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 FASTKD1Q53R41 847 aaKnown RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 LYPLAL1Q5VWZ2 237 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 CES3Q6UWW8 571 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 NAPRTQ6XQN6 538 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 CERS6Q6ZMG9 384 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 PRSS42Q7Z5A4 293 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms