RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 DGKAP23743 735 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 CD68P34810 354 aaPredicted RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 HTR2BP41595 481 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PRKCZQ05513 592 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 FCHO2Q0JRZ9 810 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 CBLBQ13191 982 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 CAMK2GQ13555 558 aaPredicted RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PAFAH1B3Q15102 231 aaKnown RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 TAB1Q15750 504 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 TXNDC11Q6PKC3 985 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 NEK10Q6ZWH5 1172 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 SLC24A5Q71RS6 500 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 CCDC28AQ8IWP9 274 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PHF10Q8WUB8 498 aaKnown RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 MED30Q96HR3 178 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 DUSP12Q9UNI6 340 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PTTG1O95997 202 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 EPORP19235 508 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 ARCN1P48444 511 aaKnown RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 GABARAPL2P60520 117 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 SH3BP2P78314 561 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 ARHGEF6Q15052 776 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 KIAA0930Q6ICG6 404 aaPredicted RBP17.49■□□□□ 0.39
LTBP3-210ENST00000528516 ANKS3Q6ZW76 656 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 MFSD6LQ8IWD5 586 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 ADHFE1Q8IWW8 467 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 GPR78Q96P69 363 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 LRRC3Q9BY71 257 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 COQ3Q9NZJ6 369 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 SNX6Q9UNH7 406 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 CLCA2Q9UQC9 943 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 PRKAB1Q9Y478 270 aa17.49■□□□□ 0.39
LTBP3-210ENST00000528516 TULP3O75386 442 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 LCKP06239 509 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 SERPINA4P29622 427 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 EEFSECP57772 596 aaKnown RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 FAM187BQ17R55 369 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 TMEM132CQ8N3T6 1108 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 GRPEL2Q8TAA5 225 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 TRIB2Q92519 343 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 COPS8Q99627 209 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 AMBRA1Q9C0C7 1298 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 REEP1Q9H902 201 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 CTPS2Q9NRF8 586 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 POLR3BQ9NW08 1133 aaPredicted RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 RABL2AQ9UBK7 228 aaPredicted RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 FBXO9Q9UK97 447 aaPredicted RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 KLHL20Q9Y2M5 609 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 ARID1AO14497 2285 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 ECI2O75521 394 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 DNTTP04053 509 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 IL12RB1P42701 662 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 CD83Q01151 205 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 RAPSNQ13702 412 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 PTPRRQ15256 657 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 ZNF792Q3KQV3 632 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 IRAK1BP1Q5VVH5 260 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 JPH3Q8WXH2 748 aaPredicted RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 TTPALQ9BTX7 342 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 GSTO2Q9H4Y5 243 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 NSUN3Q9H649 340 aaKnown RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 PCDH10Q9P2E7 1040 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 DNAJB9Q9UBS3 223 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 C12orf71A8MTZ7 269 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 SAP18O00422 153 aaKnown RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 MITFO75030 526 aaPredicted RBP17.48■□□□□ 0.39
LTBP3-210ENST00000528516 ATP4BP51164 291 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 BLOC1S3Q6QNY0 202 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 CYP20A1Q6UW02 462 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 ENPP6Q6UWR7 440 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 COL26A1Q96A83 441 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 CHCHD6Q9BRQ6 235 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 PCDHA9Q9Y5H5 950 aa17.48■□□□□ 0.39
LTBP3-210ENST00000528516 MEN1O00255 615 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 RGS13O14921 159 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 IGSF6O95976 241 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 OTCP00480 354 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 F2P00734 622 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 CKBP12277 381 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 IGFBP5P24593 272 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 SLC26A3P40879 764 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ZNF135P52742 658 aaPredicted RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 UGT3A2Q3SY77 523 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ADAMTSL2Q86TH1 951 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 RAB43Q86YS6 212 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 SLC22A15Q8IZD6 547 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 DTWD1Q8N5C7 304 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 DYNC2LI1Q8TCX1 351 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ERVK13-1Q9NX77 482 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 OAS3Q9Y6K5 1087 aaKnown RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 RP1P56715 2156 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ARVCFO00192 962 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ZNF467Q7Z7K2 595 aaPredicted RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 SERPINA9Q86WD7 417 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 PHACTR4Q8IZ21 702 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 SLC38A6Q8IZM9 456 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 UBE2J2Q8N2K1 259 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 RASSF5Q8WWW0 418 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 NTAN1Q96AB6 310 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms