RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TOM1L2Q6ZVM7 507 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 USP49Q70CQ1 688 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CREB3L2Q70SY1 520 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 TRMT10CQ7L0Y3 403 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 RAB11FIP2Q7L804 512 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKS1BQ7Z6G8 1248 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 LINC00523Q86TU6 105 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GPAT4Q86UL3 456 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 LHFPL3Q86UP9 236 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 AACSQ86V21 672 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 KBTBD6Q86V97 674 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 HIPK1Q86Z02 1210 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 EPHX4Q8IUS5 362 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 TBC1D10CQ8IV04 446 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 UNC5CLQ8IV45 518 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 FOXP4Q8IVH2 680 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CDKL3Q8IVW4 592 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CYP4Z2PQ8N1L4 340 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF619Q8N2I2 560 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PARP8Q8N3A8 854 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PRR18Q8N4B5 295 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ARL14Q8N4G2 192 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PCDH20Q8N6Y1 951 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CCDC185Q8N715 623 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 C12orf29Q8N999 325 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKRD42Q8N9B4 389 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 Q8NA96 180 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 KDM1BQ8NB78 822 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 OR7G3Q8NG95 312 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ZFAND1Q8TCF1 268 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 TSPEARQ8WU66 669 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 HEXDCQ8WVB3 486 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 RFFLQ8WZ73 363 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GTF2H4Q92759 462 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ATOH1Q92858 354 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 MAP4K1Q92918 833 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 SNAPC3Q92966 411 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PHKBQ93100 1093 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 NTAN1Q96AB6 310 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 C18orf25Q96B23 403 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 TUBGCP3Q96CW5 907 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 VPS39Q96JC1 886 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 RADILQ96JH8 1075 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CCDC17Q96LX7 622 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GCNAQ96QF7 691 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CYTH2Q99418 400 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PSMB7Q99436 277 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PKP4Q99569 1192 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CDK19Q9BWU1 502 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GTPBP2Q9BX10 602 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PINK1Q9BXM7 581 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF518BQ9C0D4 1074 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 RACGAP1Q9H0H5 632 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ALX4Q9H161 411 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 RHBGQ9H310 441 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 OR51M1Q9H341 326 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 C11orf49Q9H6J7 331 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 SYNDIG1Q9H7V2 258 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GORASP2Q9H8Y8 452 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 NANOGQ9H9S0 305 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CXorf21Q9HAI6 301 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 BCO1Q9HAY6 547 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKHQ9HCJ1 492 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 TM9SF3Q9HD45 589 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 MRPS30Q9NP92 439 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 KLHL1Q9NR64 748 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 FBXO8Q9NRD0 319 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GSN-AS1Q9NRJ2 163 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 DDX28Q9NUL7 540 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 NUDT15Q9NV35 164 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 SMARCAL1Q9NZC9 954 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 MTRRQ9UBK8 725 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 UXTQ9UBK9 157 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 LRWD1Q9UFC0 647 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GIMAP2Q9UG22 337 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ACSL5Q9ULC5 683 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PACSIN2Q9UNF0 486 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CDC14AQ9UNH5 594 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PSMD13Q9UNM6 376 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 RUVBL1Q9Y265 456 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 KCNK7Q9Y2U2 307 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 GRIP1Q9Y3R0 1128 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 AFG3L2Q9Y4W6 797 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 PCDHA13Q9Y5I0 950 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC22A7Q9Y694 548 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 MRPL42Q9Y6G3 142 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ATP8B3O60423 1300 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 STK36Q9NRP7 1315 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 ADAMTS12P58397 1594 aa3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 TDRD9Q8NDG6 1382 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-209ENST00000527299 CLTCQ00610 1675 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ARHGAP23Q9P227 1491 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 DDX60Q8IY21 1712 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CACNA1IQ9P0X4 2223 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CROCCQ5TZA2 2017 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 DLC1Q96QB1 1528 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 A0A1B0GVM2 712 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ARHGAP42A6NI28 874 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms