RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ATG10Q9H0Y0 220 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 GPRC5BQ9NZH0 403 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 EBF1Q9UH73 591 aa17.1■□□□□ 0.33
USH1C-205ENST00000527020 CREG1O75629 220 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 HPRP00739 348 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 ADH1AP07327 375 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 RETP07949 1114 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 CDK4P11802 303 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 TYRP14679 529 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 AMD1P17707 334 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 PMS2P3Q13401 168 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 TEAD2Q15562 447 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 ZNF648Q5T619 568 aaPredicted RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 ANKRD34AQ69YU3 496 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 Q6ZVL8 140 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 CLVS1Q8IUQ0 354 aaPredicted RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 KLHL23Q8NBE8 558 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 DNAJB8Q8NHS0 232 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 NETO1Q8TDF5 533 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 IRF7Q92985 503 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 ISOC1Q96CN7 298 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 YTHDF1Q9BYJ9 559 aaKnown RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 SMURF2Q9HAU4 748 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 DNAJC11Q9NVH1 559 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 AP3M1Q9Y2T2 418 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 HEMK1Q9Y5R4 338 aaPredicted RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 A0A1W2PQ67 120 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 SERTM1A2A2V5 107 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 TMEM202A6NGA9 273 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 G3V2T6 193 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 CST1P01037 141 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 CD22P20273 847 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 CYP2A7P20853 494 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 VIPR1P32241 457 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 ESRRGP62508 458 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 POLR2LP62875 67 aaKnown RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 SLC14A1Q13336 389 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 FRG2Q64ET8 278 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 CHST15Q7LFX5 561 aaPredicted RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 CLEC4FQ8N1N0 589 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 FRS2Q8WU20 508 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 ITCHQ96J02 903 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 FRG2BQ96QU4 278 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 OSBPL10Q9BXB5 764 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 OSBPL6Q9BZF3 934 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 FAM83DQ9H4H8 585 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 IFT80Q9P2H3 777 aaPredicted RBP17.09■□□□□ 0.33
USH1C-205ENST00000527020 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
USH1C-205ENST00000527020 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 FADS2P1A8MWK0 482 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 LRATO95237 230 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 C1QCP02747 245 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 ZNF30P17039 623 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 ELK4P28324 431 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 ETV3P41162 512 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 HLCSP50747 726 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 AP1S2P56377 157 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 DCDC1P59894 354 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 PPP2R2BQ00005 443 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 PGS1Q32NB8 556 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 BRAT1Q6PJG6 821 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 NEK10Q6ZWH5 1172 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 TMEM179BQ7Z7N9 219 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 ZDHHC13Q8IUH4 622 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 SORCS1Q8WY21 1168 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 ELMO1Q92556 727 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.33
USH1C-205ENST00000527020 FCRL1Q96LA6 429 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 APOLD1Q96LR9 279 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 MBOAT4Q96T53 435 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 TOR3AQ9H497 397 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 LTB4R2Q9NPC1 389 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 TIMMDC1Q9NPL8 285 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 ERVW-1Q9UQF0 538 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 TMED5Q9Y3A6 229 aa17.08■□□□□ 0.33
USH1C-205ENST00000527020 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 B4GAT1O43505 415 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 LEFTY1O75610 366 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 POLR2IP36954 125 aaKnown RBP17.08■□□□□ 0.32
USH1C-205ENST00000527020 CHIT1Q13231 466 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 CBX2Q14781 532 aaPredicted RBP17.08■□□□□ 0.32
USH1C-205ENST00000527020 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.08■□□□□ 0.32
USH1C-205ENST00000527020 TMEM132CQ8N3T6 1108 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 PJA1Q8NG27 643 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 MCOLN3Q8TDD5 553 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 CYB5D2Q8WUJ1 264 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 FBXL8Q96CD0 374 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 FAM120BQ96EK7 910 aaKnown RBP17.08■□□□□ 0.32
USH1C-205ENST00000527020 MRGPRX3Q96LB0 322 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 PCDH12Q9NPG4 1184 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 SPHK2Q9NRA0 654 aa17.08■□□□□ 0.32
USH1C-205ENST00000527020 HIDE1A8MVS5 230 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 TTC34A8MYJ7 566 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 RFPL2O75678 378 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 SERPINA1P01009 418 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 TIMP1P01033 207 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 CTSLP07711 333 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 MYCLP1P12525 358 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms