RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 CYP2A13Q16696 494 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 DEFB110Q30KQ9 67 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 DEFB109BQ30KR1 87 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CCSMST1Q4G0I0 132 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 LRRC8EQ6NSJ5 796 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 TLDC1Q6P9B6 456 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 FAM199XQ6PEV8 388 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ZNF517Q6ZMY9 492 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 IGDCC3Q8IVU1 814 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CNTN4Q8IWV2 1026 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 C17orf53Q8N3J3 647 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ZNF843Q8N446 348 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 DNAJC22Q8N4W6 341 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 EXD3Q8N9H8 876 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 SLC38A9Q8NBW4 561 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CFAP36Q96G28 342 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CHST8Q9H2A9 424 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ACTL8Q9H568 366 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 TRMT6Q9UJA5 497 aaKnown RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 SRPK3Q9UPE1 567 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 SPTA1P02549 2419 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 MYO1CO00159 1063 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 RAB40ALP0C0E4 278 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 AGXTP21549 392 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SKIV2L2P42285 1042 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 GABRA4P48169 554 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 CARSP49589 748 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 CUL1Q13616 776 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 ERV3-1Q14264 604 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 ARHGAP19Q14CB8 494 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 ZC3H12BQ5HYM0 836 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 FIGLAQ6QHK4 219 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 GALNT7Q86SF2 657 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SYVN1Q86TM6 617 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 FAM20CQ8IXL6 584 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SYTL1Q8IYJ3 562 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 LMNTD1Q8N9Z9 388 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 GIMAP7Q8NHV1 300 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 CD200R1Q8TD46 325 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 DENND1AQ8TEH3 1009 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 APOBEC4Q8WW27 367 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SMPDL3AQ92484 453 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 ZUFSPQ96AP4 578 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 PWWP2AQ96N64 755 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SLC30A3Q99726 388 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SEMA4CQ9C0C4 833 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 AKIRIN1Q9H9L7 192 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 PCMTD2Q9NV79 361 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 GEMIN8Q9NWZ8 242 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 EURLQ9NYK6 297 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 TAS2R13Q9NYV9 303 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 POLHQ9Y253 713 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 FARSAQ9Y285 508 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 MED16Q9Y2X0 877 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 SNX24Q9Y343 169 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 TEX264Q9Y6I9 313 aa16.86■□□□□ 0.29
NR1H3-228ENST00000525441 FASNP49327 2511 aaKnown RBP16.86■□□□□ 0.29
NR1H3-228ENST00000525441 ATMQ13315 3056 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 SEC16AO15027 2179 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 CDC14CA4D256 554 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 TARM1B6A8C7 271 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 C9J4A7 227 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 ZSCAN9O15535 394 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 ZBTB14O43829 449 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 PRICKLE3O43900 615 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 RPL21P46778 160 aaKnown RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 RGS4P49798 205 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 POLE2P56282 527 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 CALCOCO2Q13137 446 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 FRG1Q14331 258 aaKnown RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 STEAP4Q687X5 459 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 MCATQ8IVS2 390 aaKnown RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 FBXO15Q8NCQ5 510 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 PROKR1Q8TCW9 393 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 ASB11Q8WXH4 323 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 C17orf62Q9BQA9 187 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 NLNQ9BYT8 704 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 SPRTNQ9H040 489 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-228ENST00000525441 TUBD1Q9UJT1 453 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 KLHL20Q9Y2M5 609 aa16.85■□□□□ 0.29
NR1H3-228ENST00000525441 KRT87PA6NCN2 255 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 ERGP11308 486 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 CMPK1P30085 196 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 RPA3P35244 121 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-228ENST00000525441 PDIA2Q13087 525 aaKnown RBP16.84■□□□□ 0.29
NR1H3-228ENST00000525441 PTCHD3Q3KNS1 767 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 TEDDM1Q5T9Z0 273 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 ATP1A1-AS1Q5TC04 95 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 RHBDD2Q6NTF9 364 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 CPNE9Q8IYJ1 553 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 ZNF655Q8N720 491 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-228ENST00000525441 OR2L3Q8NG85 312 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 DLG3Q92796 817 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 NDNQ99608 321 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 MIPEPQ99797 713 aa16.84■□□□□ 0.29
NR1H3-228ENST00000525441 ERP44Q9BS26 406 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms