RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 EIPR1Q53HC9 387 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 RHBDF2Q6PJF5 856 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 LENG8Q96PV6 779 aaPredicted RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF347Q96SE7 839 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 DUSP16Q9BY84 665 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 CLUHO75153 1309 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 FAM205AQ6ZU69 1335 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TLR4O00206 839 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ADGRE1Q14246 886 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 SEC23BQ15437 767 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 AKR1C8PQ5T2L2 129 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 OR10G2Q8NGC3 310 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 S100A16Q96FQ6 103 aaKnown RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 C12orf65Q9H3J6 166 aaKnown RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 NMUR1Q9HB89 426 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TMEM45AQ9NWC5 275 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 A0A1B0GVT2 93 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TOXO94900 526 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 C2P06681 752 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TOB1P50616 345 aaPredicted RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 PPM1JQ5JR12 505 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 LDB1Q86U70 411 aaPredicted RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 KIF18BQ86Y91 864 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TCTEX1D2Q8WW35 142 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 YIPF4Q9BSR8 244 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ITPAQ9BY32 194 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 RHOJQ9H4E5 214 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 WDR45Q9Y484 360 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 WASF2Q9Y6W5 498 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TSPAN15O95858 294 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 GLDCP23378 1020 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 CLCQ05315 142 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 LRRC66Q68CR7 880 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 CFAP52Q8N1V2 620 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 A0A0A6YYH2 397 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 A6NJ64 397 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 TRIM28Q13263 835 aaKnown RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 NKAPLQ5M9Q1 402 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 KANK2Q63ZY3 851 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 STYK1Q6J9G0 422 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 ZC3HC1Q86WB0 502 aaKnown RBP13.41□□□□□ -0.26
LRRK1-202ENST00000525284 CNTD1Q8N815 330 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 BORCS7Q96B45 105 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 COLEC10Q9Y6Z7 277 aa13.41□□□□□ -0.26
LRRK1-202ENST00000525284 RECQL4O94761 1208 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 MARCKSL1P49006 195 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 CDKN1CP49918 316 aaPredicted RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 PCBP2Q15366 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 GPR21Q99679 349 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 PROM1O43490 865 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 SCNN1GP51170 649 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 LAPTM5Q13571 262 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 OR6Q1Q8NGQ2 317 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 EIF2B4Q9UI10 523 aaKnown RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 OR2AG2A6NM03 316 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 EI24O14681 340 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 RPP40O75818 363 aaKnown RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 CYP11A1P05108 521 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 CYP1A2P05177 515 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 SLC35G6P0C7Q6 338 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 NR0B1P51843 470 aaKnown RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 TEAD4Q15561 434 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 ADAM2Q99965 735 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 DPCDQ9BVM2 203 aaPredicted RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 DNAJB9Q9UBS3 223 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 A0A1W2PQ67 120 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 NEDD8-MDP1E9PL57 170 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 DNAJA2O60884 412 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 LILRB5O75023 590 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 NUDT17P0C025 328 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 RAP2AP10114 183 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 KELP23276 732 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 RPIAP49247 311 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 NKX6-1P78426 367 aaPredicted RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 CYP27C1Q4G0S4 372 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 LHFPL3Q86UP9 236 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 SLC25A44Q96H78 314 aaPredicted RBP13.4□□□□□ -0.26
LRRK1-202ENST00000525284 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 PNPLA6Q8IY17 1366 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 IDSP22304 550 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 ALDH3B2P48448 385 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 DGKEP52429 567 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 RAB15P59190 212 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 FOXM1Q08050 763 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 PTGR1Q14914 329 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 CREB3L1Q96BA8 519 aa13.4□□□□□ -0.26
LRRK1-202ENST00000525284 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms