RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KLK3P07288 261 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 HBQ1P09105 142 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCNYL3P0C7X3 344 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MSL3P1P0C860 447 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 FGF5P12034 268 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 PVRP15151 417 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 FOLR1P15328 257 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ST6GAL1P15907 406 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 HRH2P25021 359 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CNTFP26441 200 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MSH2P43246 934 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SERPINB8P50452 374 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SERPINB9P50453 376 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TAS2R39P59534 338 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPX6P59796 221 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 RAB10P61026 200 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ATP6V0D1P61421 351 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SH3BP2P78314 561 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ABATP80404 500 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MAP7Q14244 749 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 KCNAB1Q14722 419 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPR19Q15760 415 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 LGSNQ5TDP6 509 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CAPN13Q6MZZ7 669 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 KLC3Q6P597 504 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 C6orf15Q6UXA7 325 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ADCK2Q7Z695 626 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZFAND4Q86XD8 727 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPACA3Q8IXA5 215 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CACNA2D3Q8IZS8 1091 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 NLGN4XQ8N0W4 816 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 C2orf73Q8N5S3 287 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TBC1D19Q8N5T2 526 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 BMPERQ8N8U9 685 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 EIF1ADQ8N9N8 165 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 LMNTD1Q8N9Z9 388 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 LINC01555Q8NAE3 123 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 NLGN4YQ8NFZ3 816 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR2L3Q8NG85 312 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANKRD7Q92527 254 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 DLG3Q92796 817 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 RERGQ96A58 199 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ALKBH8Q96BT7 664 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CLIP3Q96DZ5 547 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MRRFQ96E11 262 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MED8Q96G25 268 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 PDLIM5Q96HC4 596 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TRAPPC9Q96Q05 1148 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR2A14Q96R47 310 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCNL2Q96S94 520 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 PKP4Q99569 1192 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPR22Q99680 433 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC30A3Q99726 388 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 OLFM1Q99784 485 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MIPEPQ99797 713 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 EGFL8Q99944 293 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 C17orf62Q9BQA9 187 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCDC77Q9BR77 488 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 HAUS8Q9BT25 410 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 NDC1Q9BTX1 674 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ACAT2Q9BWD1 397 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC12A9Q9BXP2 914 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 NLNQ9BYT8 704 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 KLHL25Q9H0H3 589 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ACSS3Q9H6R3 686 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPN2Q9H9Y4 310 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MRPS30Q9NP92 439 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TXLNGQ9NUQ3 528 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SIDT1Q9NXL6 827 aaKnown RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPHK1Q9NYA1 384 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 NINJ2Q9NZG7 142 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANKMY1Q9P2S6 941 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 CTNNAL1Q9UBT7 734 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 TAC3Q9UHF0 121 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SRPK3Q9UPE1 567 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 PLCL2Q9UPR0 1127 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 MED16Q9Y2X0 877 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 AP1M2Q9Y6Q5 423 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARID1BQ8NFD5 2236 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 LAMA1P25391 3075 aa5.21□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPTBN2O15020 2390 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 NPEPPSL1A6NEC2 478 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TARM1B6A8C7 271 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 C9J4A7 227 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 POC1B-GALNT4F8VUJ3 575 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZSCAN9O15535 394 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PHGDHO43175 533 aaKnown RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PIAS1O75925 651 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 KRT37O76014 449 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 GUCA1CO95843 209 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANXA5P08758 320 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ABHD2P08910 425 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCDC166P0CW27 439 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ERGP11308 486 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 EZRP15311 586 aaKnown RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 MAGP20916 626 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 AGXTP21549 392 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TNFRSF8P28908 595 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms