RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 IRAK2O43187 625 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 ASNA1O43681 348 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 SNX2O60749 519 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 TBL1XO60907 577 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 USP1O94782 785 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 PPP3CBP16298 524 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 ZNF18P17022 549 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 CASP6P55212 293 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 SLC25A3Q00325 362 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 GUCY1B3Q02153 619 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 NSUN2Q08J23 767 aaKnown RBP eCLIP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 GPS1Q13098 491 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 LAMB3Q13751 1172 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 ALG11Q2TAA5 492 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 KRTAP24-1Q3LI83 254 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 BMP2KLQ5H9B9 411 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 HAUS3Q68CZ6 603 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 ADALQ6DHV7 355 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 CRELD2Q6UXH1 353 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 ERN2Q76MJ5 926 aaKnown RBP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 SCD5Q86SK9 330 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 BCORP1Q8N888 145 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 MYEOVQ96EZ4 313 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 PLEKHG4BQ96PX9 1271 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 HIST1H2AAQ96QV6 131 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 WDR77Q9BQA1 342 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 MED10Q9BTT4 135 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 ZNF703Q9H7S9 590 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM8AQ9HCN3 771 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 LHX9Q9NQ69 397 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 TBCCD1Q9NVR7 557 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM9Q9P0T7 183 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 TESQ9UGI8 421 aaKnown RBP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 SIX4Q9UIU6 781 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 NAP1L2Q9ULW6 460 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-203ENST00000524927 KIF3AQ9Y496 699 aa6.79□□□□□ -1.32
NEDD8-203ENST00000524927 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 IGHV1OR21-1A0A087WYE8 117 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 PP2D1A8MPX8 630 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM110-MUSTN1A8MSY1 372 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 B4DGG1 531 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SPDEFO95238 335 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 CD19P15391 556 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 NR4A1P22736 598 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 UQCRC1P31930 480 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 STK19P49842 368 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-203ENST00000524927 PEX5P50542 639 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SGSHP51688 502 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 TDGF1P3P51864 188 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 RPS15P62841 145 aaKnown RBP6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SULT2A1Q06520 285 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 RAPSNQ13702 412 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 POSTNQ15063 836 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 TIGD6Q17RP2 521 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SPDYAQ5MJ70 313 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 NKAIN2Q5VXU1 208 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SPECC1LQ69YQ0 1117 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 ZNF324BQ6AW86 544 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SLC39A4Q6P5W5 647 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 GFRALQ6UXV0 394 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 C1orf186Q6ZWK4 172 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 RASGRP3Q8IV61 690 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 SFTPA2Q8IWL1 248 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 FAM109AQ8N4B1 249 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 ARFGAP1Q8N6T3 406 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 KIAA1524Q8TCG1 905 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 ATG4AQ8WYN0 398 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 C19orf24Q9BVV8 132 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 TMEM120AQ9BXJ8 343 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 POLDIP3Q9BY77 421 aaKnown RBP6.78□□□□□ -1.32
NEDD8-203ENST00000524927 DPEP2Q9H4A9 486 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 ZDHHC6Q9H6R6 413 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 EPS8L2Q9H6S3 715 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 AGO2Q9UKV8 859 aaKnown RBP6.78□□□□□ -1.32
NEDD8-203ENST00000524927 USP22Q9UPT9 525 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 BTRCQ9Y297 605 aa6.78□□□□□ -1.32
NEDD8-203ENST00000524927 A8MXQ7 604 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 H7C1Q1 480 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 KPNA3O00505 521 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-203ENST00000524927 FCHO1O14526 889 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 NEMFO60524 1076 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 CTAG2O75638 210 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 KIAA0754O94854 1291 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 DEXIO95424 95 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 PDHA1P08559 390 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 ITGA5P08648 1049 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 NPPBP16860 134 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 MST1P26927 711 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 EPHA3P29320 983 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 NDST1P52848 882 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 SLC12A3P55017 1021 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 SRP54P61011 504 aaKnown RBP6.77□□□□□ -1.33
NEDD8-203ENST00000524927 FOXO1Q12778 655 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 CDC16Q13042 620 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 TP53BP2Q13625 1128 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 CDH18Q13634 790 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 KLHL17Q6TDP4 642 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 PAMR1Q6UXH9 720 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 CCDC186Q7Z3E2 898 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms