RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SELPLGQ14242 412 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 MAPKAPK3Q16644 382 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 USP39Q53GS9 565 aaKnown RBP13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 LIPIQ6XZB0 460 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 C12orf40Q86WS4 652 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 RALGPS2Q86X27 583 aaPredicted RBP13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 FAM9CQ8IZT9 166 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 ADAMTS16Q8TE57 1224 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 NUDT8Q8WV74 236 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 GLMNQ92990 594 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 PYCR2Q96C36 320 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 AP2M1Q96CW1 435 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 NSMCE2Q96MF7 247 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 PIF1Q9H611 641 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 TIMMDC1Q9NPL8 285 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 ATXN10Q9UBB4 475 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 FAM8A1Q9UBU6 413 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 USP22Q9UPT9 525 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 LRRK1Q38SD2 2015 aa13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 MUC22E2RYF6 1773 aaPredicted RBP13.4□□□□□ -0.26
LDLRAD3-202ENST00000524419 FAM149AA5PLN7 773 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 TRIM64A6NGJ6 449 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 PSMD11O00231 422 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 WNT9AO14904 365 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 TSPAN6O43657 245 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 TULP3O75386 442 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 PRNPP04156 253 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 PRPS2P11908 318 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 EN2P19622 333 aaPredicted RBP13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 HRH2P25021 359 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 SLC5A2P31639 672 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 SOX11P35716 441 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 HALP42357 657 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 RPS14P62263 151 aaKnown RBP13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 PLIN5Q00G26 463 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 ZXDCQ2QGD7 858 aaPredicted RBP13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 FNDC3BQ53EP0 1204 aaKnown RBP13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 SPANXN4Q5MJ08 99 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 PDE12Q6L8Q7 609 aaKnown RBP13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 NEK5Q6P3R8 708 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 RASGRP3Q8IV61 690 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 KRTCAP2Q8N6L1 136 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 RASGEF1AQ8N9B8 481 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 TMEM159Q96B96 161 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 RSPRY1Q96DX4 576 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 CMTM7Q96FZ5 175 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 FAM83CQ9BQN1 747 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 OAZ3Q9UMX2 235 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 SLC22A14Q9Y267 594 aa13.4□□□□□ -0.27
LDLRAD3-202ENST00000524419 CROCCQ5TZA2 2017 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 KIAA1549LQ6ZVL6 1849 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 A0A1B0GVG6 124 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 GMNNO75496 209 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 TRMUO75648 421 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 NFATC1O95644 943 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 PGRP06401 933 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 PCSK2P16519 638 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 NELFEP18615 380 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 PRPH2P23942 346 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 VIPR2P41587 438 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 MAPK9P45984 424 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 PRLHRP49683 370 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 GRIN2CQ14957 1233 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 TTC33Q6PID6 262 aaPredicted RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 RBM23Q86U06 439 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 ERI1Q8IV48 349 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 C7orf61Q8IZ16 206 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 AADATQ8N5Z0 425 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 CLHC1Q8NHS4 586 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 ATL1Q8WXF7 558 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 GTF2H4Q92759 462 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 BIRC7Q96CA5 298 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 CCM2Q9BSQ5 444 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 WRAP53Q9BUR4 548 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 ATG10Q9H0Y0 220 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 TMED5Q9Y3A6 229 aa13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 TCF20Q9UGU0 1960 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-202ENST00000524419 TMEM202A6NGA9 273 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 ARHGEF33A8MVX0 844 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 DFNA5O60443 496 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 LDLRP01130 860 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 JUPP14923 745 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 MYOGP15173 224 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 CYP4F3Q08477 520 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 ABRQ12979 859 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 PLA2G4EQ3MJ16 856 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 FRG2Q64ET8 278 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 GLYATQ6IB77 296 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 ARHGAP22Q7Z5H3 698 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 DNAJB8Q8NHS0 232 aa13.38□□□□□ -0.27
LDLRAD3-202ENST00000524419 NXPE3Q969Y0 559 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms