RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 GRM7Q14831 915 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 ABHD17BQ5VST6 288 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 FCRLBQ6BAA4 426 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 MFSD7Q6UXD7 560 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 CTNNBL1Q8WYA6 563 aaPredicted RBP11.11□□□□□ -0.63
SDCBP-211ENST00000523441 NACC2Q96BF6 587 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 SDCCAG3Q96C92 435 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 C14orf79Q96F83 325 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 HES7Q9BYE0 225 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 GPAMQ9HCL2 828 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 ZNF304Q9HCX3 659 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 ANKRD10Q9NXR5 420 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 ZDHHC3Q9NYG2 299 aa11.11□□□□□ -0.63
SDCBP-211ENST00000523441 ZC3H7BQ9UGR2 993 aaKnown RBP11.11□□□□□ -0.63
SDCBP-211ENST00000523441 NXT1Q9UKK6 140 aaKnown RBP11.11□□□□□ -0.63
SDCBP-211ENST00000523441 NPIPA5E9PKD4 350 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 CST8O60676 142 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 PRAMEF2O60811 474 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 EPOP01588 193 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 DRD2P14416 443 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 ABOP16442 354 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 FBLP22087 321 aaKnown RBP11.1□□□□□ -0.63
SDCBP-211ENST00000523441 SOX11P35716 441 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 CARSP49589 748 aaKnown RBP11.1□□□□□ -0.63
SDCBP-211ENST00000523441 HSF1Q00613 529 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 SF1Q15637 639 aaKnown RBP11.1□□□□□ -0.63
SDCBP-211ENST00000523441 INAQ16352 499 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.1□□□□□ -0.63
SDCBP-211ENST00000523441 WASHC2DQ5SRD0 308 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 NDUFAF7Q7L592 441 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 SNX20Q7Z614 316 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 DNAJB8Q8NHS0 232 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 CA5BP1Q8WTZ4 195 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 HAS2Q92819 552 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 FCRL5Q96RD9 977 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 SLC26A1Q9H2B4 701 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SDCBP-211ENST00000523441 OR6C2Q9NZP2 312 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 ZNF282Q9UDV7 671 aaPredicted RBP11.1□□□□□ -0.63
SDCBP-211ENST00000523441 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 MEMO1Q9Y316 297 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 PRSS21Q9Y6M0 314 aa11.1□□□□□ -0.63
SDCBP-211ENST00000523441 GTF3C1Q12789 2109 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 A0A0J9YVX5 310 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 HYKKA2RU49 373 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 OR5H15A6NDH6 313 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 FANCGO15287 622 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 NRP2O60462 931 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 CRTAMO95727 393 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 SERPINC1P01008 464 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 SERPINA7P05543 415 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 H2AFZP0C0S5 128 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 EMP2P54851 167 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 ALDH6A1Q02252 535 aaKnown RBP11.09□□□□□ -0.63
SDCBP-211ENST00000523441 RPA4Q13156 261 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 KIR2DS3Q14952 304 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 ZNF766Q5HY98 468 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 FRMPD2BQ6IN97 320 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 FIGLAQ6QHK4 219 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
SDCBP-211ENST00000523441 H2AFVQ71UI9 128 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 TBC1D21Q8IYX1 336 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 DENND1AQ8TEH3 1009 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 AGAP11Q8TF27 550 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
SDCBP-211ENST00000523441 TMEM121Q9BTD3 319 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 STMN3Q9NZ72 180 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 TRPC4Q9UBN4 977 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 POLG2Q9UHN1 485 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 BZW2Q9Y6E2 419 aaKnown RBP11.09□□□□□ -0.63
SDCBP-211ENST00000523441 SPG11Q96JI7 2443 aa11.09□□□□□ -0.63
SDCBP-211ENST00000523441 IGHV3-20A0A0C4DH32 117 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 VSTM2BA6NLU5 285 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 FAM90A27PA6NNH2 459 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 IDSB3KWA1 339 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 H7C0C1 242 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 BMP10O95393 424 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 HEXBP07686 556 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 ERVK-10P10266 1014 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 ACRV1P26436 265 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 PSMB5P28074 263 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 GCGRP47871 477 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 ATP5OP48047 213 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 GEMP55040 296 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 DBN1Q16643 649 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 FAM214AQ32MH5 1076 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 ZNF658BQ4V348 819 aaPredicted RBP11.08□□□□□ -0.64
SDCBP-211ENST00000523441 ZC3H12BQ5HYM0 836 aaKnown RBP11.08□□□□□ -0.64
SDCBP-211ENST00000523441 TCTE1Q5JU00 501 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 ATG9BQ674R7 924 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 SPPL2CQ8IUH8 684 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 TAB3Q8N5C8 712 aaPredicted RBP11.08□□□□□ -0.64
SDCBP-211ENST00000523441 DNAAF3Q8N9W5 541 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 LINC01555Q8NAE3 123 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 OR5K2Q8NHB8 316 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 HEXDCQ8WVB3 486 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 P3H4Q92791 437 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 CABS1Q96KC9 395 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms