RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CD63P08962 238 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 CBSLP0DN79 551 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 NR1D1P20393 614 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 CBSP35520 551 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 PTGIRP43119 386 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 MAGEA3P43357 314 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 DCDP81605 110 aaKnown RBP15.6■□□□□ 0.09
CLN8-206ENST00000523237 KLRB1Q12918 225 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 LONRF1Q17RB8 773 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 CCSMST1Q4G0I0 132 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 C1orf189Q5VU69 101 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 FAM69BQ5VUD6 431 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 CPZQ66K79 652 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 FIGLAQ6QHK4 219 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 ASB18Q6ZVZ8 466 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 MCATQ8IVS2 390 aaKnown RBP15.6■□□□□ 0.09
CLN8-206ENST00000523237 LMNTD2Q8IXW0 634 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 ZBTB2Q8N680 514 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 HMGCLL1Q8TB92 370 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 CALML6Q8TD86 181 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 DENND1AQ8TEH3 1009 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 DLG3Q92796 817 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 ZUFSPQ96AP4 578 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 GBP5Q96PP8 586 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 EPN3Q9H201 632 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 CCDC68Q9H2F9 335 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 KCNF1Q9H3M0 494 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 SPATA7Q9P0W8 599 aa15.6■□□□□ 0.09
CLN8-206ENST00000523237 IFT80Q9P2H3 777 aaPredicted RBP15.6■□□□□ 0.09
CLN8-206ENST00000523237 DHCR7Q9UBM7 475 aaKnown RBP15.6■□□□□ 0.09
CLN8-206ENST00000523237 TSR3Q9UJK0 312 aaKnown RBP15.6■□□□□ 0.09
CLN8-206ENST00000523237 BSNQ9UPA5 3926 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 TNRC6AQ8NDV7 1962 aaKnown RBP15.59■□□□□ 0.09
CLN8-206ENST00000523237 TARM1B6A8C7 271 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 K7EM74 188 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 PRICKLE3O43900 615 aaPredicted RBP15.59■□□□□ 0.09
CLN8-206ENST00000523237 TCP1P17987 556 aaKnown RBP15.59■□□□□ 0.09
CLN8-206ENST00000523237 ARSFP54793 590 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 CHAF1BQ13112 559 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 KLHL38Q2WGJ6 581 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 TTLL9Q3SXZ7 439 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 ACSBG2Q5FVE4 666 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 RNASEH2BQ5TBB1 312 aaKnown RBP15.59■□□□□ 0.09
CLN8-206ENST00000523237 MLIPQ5VWP3 458 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 FCRL6Q6DN72 434 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 RAB43Q86YS6 212 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 TEX19Q8NA77 164 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 ANP32BQ92688 251 aaKnown RBP15.59■□□□□ 0.09
CLN8-206ENST00000523237 SIGLEC10Q96LC7 697 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 FAM114A2Q9NRY5 505 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 C20orf96Q9NUD7 363 aaPredicted RBP15.59■□□□□ 0.09
CLN8-206ENST00000523237 GALPQ9UBC7 116 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 NDOR1Q9UHB4 597 aa15.59■□□□□ 0.09
CLN8-206ENST00000523237 MED13Q9UHV7 2174 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 KRT87PA6NCN2 255 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 KLF7O75840 302 aaPredicted RBP15.58■□□□□ 0.08
CLN8-206ENST00000523237 CATP04040 527 aaKnown RBP15.58■□□□□ 0.08
CLN8-206ENST00000523237 PSMB5P28074 263 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 GRIA3P42263 894 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 CCL11P51671 97 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 CLCN7P51798 805 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 RRADP55042 308 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 CTBP1Q13363 440 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 NAA25Q14CX7 972 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 NKAIN1Q4KMZ8 207 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 TCTE1Q5JU00 501 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 MED25Q71SY5 747 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 PCGF5Q86SE9 256 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 DENND6AQ8IWF6 608 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 AGGF1Q8N302 714 aaeCLIP15.58■□□□□ 0.08
CLN8-206ENST00000523237 TMEM102Q8N9M5 508 aaPredicted RBP15.58■□□□□ 0.08
CLN8-206ENST00000523237 OR9A1PQ8NGU1 263 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 KCNJ9Q92806 393 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 MIPEPQ99797 713 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 FAM167BQ9BTA0 163 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 SLC25A23Q9BV35 468 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 DDX47Q9H0S4 455 aaKnown RBP15.58■□□□□ 0.08
CLN8-206ENST00000523237 FBXO6Q9NRD1 293 aaPredicted RBP15.58■□□□□ 0.08
CLN8-206ENST00000523237 KLHL42Q9P2K6 505 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 ASIC3Q9UHC3 531 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 PCDHGA9Q9Y5G4 932 aaKnown RBP15.58■□□□□ 0.08
CLN8-206ENST00000523237 FAM169AQ9Y6X4 670 aa15.58■□□□□ 0.08
CLN8-206ENST00000523237 ARHGEF33A8MVX0 844 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 DNALI1O14645 258 aaPredicted RBP15.57■□□□□ 0.08
CLN8-206ENST00000523237 PSIP1O75475 530 aaKnown RBP15.57■□□□□ 0.08
CLN8-206ENST00000523237 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 ALAS2P22557 587 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 FOLR3P41439 243 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 SLC1A2P43004 574 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 PGDP52209 483 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 PTK6Q13882 451 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 SSPNQ14714 243 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 GRM7Q14831 915 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 SLC9A5Q14940 896 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 ARHGAP19Q14CB8 494 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 CYP2A13Q16696 494 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 YOD1Q5VVQ6 348 aaPredicted RBP15.57■□□□□ 0.08
CLN8-206ENST00000523237 NEK10Q6ZWH5 1172 aa15.57■□□□□ 0.08
CLN8-206ENST00000523237 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLN8-206ENST00000523237 OR2L3Q8NG85 312 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms