RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SCARA3Q6AZY7 606 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ZPBP2Q6X784 338 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 RBM44Q6ZP01 1051 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 C15orf39Q6ZRI6 1047 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 RRAGAQ7L523 313 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SLC26A9Q7LBE3 791 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 BMP8AQ7Z5Y6 402 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ADGRG6Q86SQ4 1221 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 FAM35AQ86V20 835 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 IQCHQ86VS3 1027 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CATSPER3Q86XQ3 398 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 UBALD2Q8IYN6 164 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 BHLHE23Q8NDY6 225 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ECHDC3Q96DC8 303 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 FEM1CQ96JP0 617 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 APOLD1Q96LR9 279 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 PPP3R2Q96LZ3 170 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 TMEM74Q96NL1 305 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 INTS14Q96SY0 518 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SSX3Q99909 188 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 VRK1Q99986 396 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 C2orf88Q9BSF0 95 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 C1QTNF3Q9BXJ4 246 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 MRPL44Q9H9J2 332 aaKnown RBP7.36□□□□□ -1.23
HDAC3-216ENST00000523088 FOLH1BQ9HBA9 442 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CPNE5Q9HCH3 593 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CTPS2Q9NRF8 586 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 SOHLH2Q9NX45 425 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ABCD2Q9UBJ2 740 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 LRWD1Q9UFC0 647 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 NDOR1Q9UHB4 597 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 ACSL5Q9ULC5 683 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 STAP1Q9ULZ2 295 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 COPS3Q9UNS2 423 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 MAN2B2Q9Y2E5 1009 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 CLCA3PQ9Y6N3 262 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 TECTAO75443 2155 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 MUC6Q6W4X9 2439 aa7.36□□□□□ -1.23
HDAC3-216ENST00000523088 TRIP11Q15643 1979 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 C2orf16Q68DN1 1984 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 SF3B1O75533 1304 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■■■■ 109.1
HDAC3-216ENST00000523088 FAM92AA1XBS5 289 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ARL5CA6NH57 179 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 METTL15A6NJ78 407 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 DRGXA6NNA5 263 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 RHPN2P1A8MT19 583 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 HIDE1A8MVS5 230 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ARNTLO00327 626 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TRAFD1O14545 582 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 VEGFDO43915 354 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 PPP6R2O75170 966 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 H2AFYO75367 372 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 KAT7O95251 611 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 IL18RAPO95256 599 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 DIRAS3O95661 229 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ONECUT2O95948 504 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 INHBBP09529 407 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ZDHHC11BP0C7U3 371 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 SPATA31C1P0DKV0 1188 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CBSLP0DN79 551 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 G0S2P27469 103 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 LAP3P28838 519 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 EPHB2P29323 1055 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CBSP35520 551 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 GPX4P36969 197 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 PAFAH1B1P43034 410 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 LEPRP48357 1165 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 GLUD2P49448 558 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 METAP1P53582 386 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CLDN8P56748 225 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 KCNJ2P63252 427 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ACSM1Q08AH1 577 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ST3GAL1Q11201 340 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 KCNMA1Q12791 1236 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 STRN3Q13033 797 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 HNF4GQ14541 408 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TOMM34Q15785 309 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CCDC6Q16204 474 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 FAM69AQ5T7M9 428 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ATPAF1Q5TC12 328 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 AGBL2Q5U5Z8 902 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 KCTD11Q693B1 232 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 NAPEPLDQ6IQ20 393 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TSSK4Q6SA08 328 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 PADI6Q6TGC4 694 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ISLR2Q6UXK2 745 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 LRRC74BQ6ZQY2 392 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 KIAA0408Q6ZU52 694 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 SV2AQ7L0J3 742 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 VASH2Q86V25 355 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 KIF18BQ86Y91 864 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CTAGE3PQ8IX95 158 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 LNX2Q8N448 690 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 LRRC17Q8N6Y2 441 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 EIF1ADQ8N9N8 165 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TDRD5Q8NAT2 981 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TMEM35BQ8NCS4 154 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms