RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 MUS81Q96NY9 551 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TCF25Q9BQ70 676 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 EBPLQ9BY08 206 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 UGT2B28Q9BY64 529 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SMURF2Q9HAU4 748 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SPHK2Q9NRA0 654 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 DNAJC11Q9NVH1 559 aa10.47□□□□□ -0.73
RAB11FIP1-204ENST00000522774 WASH3PC4AMC7 463 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ARHGEF15O94989 841 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TIMP1P01033 207 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ALBP02768 609 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CTSLP07711 333 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MYCLP1P12525 358 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CD22P20273 847 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CYP2A7P20853 494 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 VIPR1P32241 457 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HALP42357 657 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HNMTP50135 292 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC14A1Q13336 389 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PON2Q15165 354 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LRIF1Q5T3J3 769 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PLPP4Q5VZY2 271 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ZNF551Q7Z340 670 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CYP2U1Q7Z449 544 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CALHM3Q86XJ0 350 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CLEC4FQ8N1N0 589 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LILRA3Q8N6C8 439 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OR10Q1Q8NGQ4 319 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NETO1Q8TDF5 533 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ADAMTS16Q8TE57 1224 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FRS2Q8WU20 508 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NCLNQ969V3 563 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CMTM7Q96FZ5 175 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RIOK2Q9BVS4 552 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NPLQ9BXD5 320 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KCNH6Q9H252 994 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TDP1Q9NUW8 608 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ERVW-1Q9UQF0 538 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MAN2B2Q9Y2E5 1009 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PLXNA2O75051 1894 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 A0A096LPI6 279 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 B4GAT1O43505 415 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CREG1O75629 220 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CST1P01037 141 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 THRBP10828 461 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TIMP2P16035 220 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 AMD1P17707 334 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ELK4P28324 431 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 WEE1P30291 646 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NRIP1P48552 1158 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NTHL1P78549 312 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CHIT1Q13231 466 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FRG2Q64ET8 278 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 OR4F3Q6IEY1 312 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TTC23LQ6PF05 361 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GPR141Q7Z602 305 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GPR149Q86SP6 731 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CLVS1Q8IUQ0 354 aaPredicted RBP10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZNF366Q8N895 744 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FAM120BQ96EK7 910 aaKnown RBP10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MRGPRX3Q96LB0 322 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FRG2BQ96QU4 278 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SH3GL1Q99961 368 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 EBF1Q9UH73 591 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NOTCH4Q99466 2003 aa10.46□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PABPN1LA6NDY0 278 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZBBXA8MT70 800 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NOBOXO60393 691 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ERN1O75460 977 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SCELO95171 688 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PRPS2P11908 318 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RECQLP46063 649 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ABRQ12979 859 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SP140Q13342 867 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PMS2P3Q13401 168 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CCSMST1Q4G0I0 132 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 AP1ARQ63HQ0 302 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ATG9BQ674R7 924 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 BRAT1Q6PJG6 821 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ALDH16A1Q8IZ83 802 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MCOLN3Q8TDD5 553 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 HEPHQ9BQS7 1158 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TOR3AQ9H497 397 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DCAF13Q9NV06 445 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DNAJB9Q9UBS3 223 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CDC14AQ9UNH5 594 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CDH23Q9H251 3354 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ARHGEF33A8MVX0 844 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FAM220BPB1ANY3 271 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 G3V2T6 193 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 H0YAE9 185 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SERPINA1P01009 418 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RHOP08100 348 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZNF30P17039 623 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms