RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ABT1Q9ULW3 272 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 SH2B3Q9UQQ2 575 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 NIP7Q9Y221 180 aaKnown RBP eCLIP3.87□□□□□ -1.79
SKP1-209ENST00000522552 STK38LQ9Y2H1 464 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ZNF510Q9Y2H8 683 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SH3GLB1Q9Y371 365 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 HEMK1Q9Y5R4 338 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 ABCC4O15439 1325 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SF3B1O75533 1304 aaKnown RBP eCLIP3.87□□□□□ -1.79
SKP1-209ENST00000522552 MAP3K19Q56UN5 1328 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SPATA31A1Q5TZJ5 1347 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SPATA31A5Q5VU36 1347 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SPATA31A7Q8IWB4 1347 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CENPJQ9HC77 1338 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 A0A087X0K7 114 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 CXorf65A6NEN9 183 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SLC15A5A6NIM6 579 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 OR52A4PA6NMU1 304 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 H3BMM5 538 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 XRCC3O43542 346 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SSX4O60224 188 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CIDEAO60543 219 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 MFAP3LO75121 409 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ZNF254O75437 659 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PDE9AO76083 593 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 C9P02748 559 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TNNI3P19429 210 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 NCF2P19878 526 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 UBA1P22314 1058 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 FPR3P25089 353 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ELAVL4P26378 380 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 HLA-FP30511 346 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 HOXC9P31274 260 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 APOBEC3AP31941 199 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 ADRA1AP35348 466 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 LONP1P36776 959 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 FMO5P49326 533 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SCNN1GP51170 649 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 GSDMDP57764 484 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ITGADQ13349 1161 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 MFSD13AQ14CX5 517 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CARTPTQ16568 116 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TPD52L1Q16890 204 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 CTU2Q2VPK5 515 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 ANXA2RQ3ZCQ2 193 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CERKLQ49MI3 558 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PLEKHO1Q53GL0 409 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 LACTB2Q53H82 288 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 XKR3Q5GH77 459 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TEDDM1Q5T9Z0 273 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ALS2CLQ60I27 953 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 NSUN5P2Q63ZY6 315 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SP5Q6BEB4 398 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PLEKHA7Q6IQ23 1121 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 DHRS13Q6UX07 377 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 Q6ZWC4 215 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SPATA24Q86W54 205 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ANKRD46Q86W74 232 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TMEM132CQ8N3T6 1108 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PAQR4Q8N4S7 273 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PARP16Q8N5Y8 322 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TTC9BQ8N6N2 239 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 OR1J2Q8NGS2 313 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 OR2AJ1Q8NGZ0 328 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 RAB3IL1Q8TBN0 382 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SLC22A8Q8TCC7 542 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CACTINQ8WUQ7 758 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 ADAMTS14Q8WXS8 1223 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CELF1Q92879 486 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 WBP2Q969T9 261 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 FKBP10Q96AY3 582 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 RHBDF1Q96CC6 855 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 OXNAD1Q96HP4 312 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PRMT6Q96LA8 375 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 OR6C1Q96RD1 312 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 RIOK1Q9BRS2 568 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 C16orf70Q9BSU1 422 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TRMOQ9BU70 441 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TEX101Q9BY14 249 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PKIBQ9C010 78 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 RAD21L1Q9H4I0 556 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 FN3KRPQ9HA64 309 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 GPR108Q9NPR9 543 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 FAM207AQ9NSI2 230 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 DONSONQ9NYP3 566 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 THEGQ9P2T0 379 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 NDRG3Q9UGV2 375 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CHMP2BQ9UQN3 213 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 MRPS33Q9Y291 106 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 SIRT4Q9Y6E7 314 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 NPC1L1Q9UHC9 1359 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 TMEM129A0AVI4 362 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 ASB14A6NK59 587 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 C4orf47A7E2U8 309 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 GOLGA8SH3BPF8 625 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 SLC22A2O15244 555 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 GRID2O43424 1007 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 SPDEFO95238 335 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 APEHP13798 732 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms