RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 RARAP10276 462 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 ZNF24P17028 368 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 MAGP20916 626 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 PDHA2P29803 388 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 CD96P40200 585 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 RFC3P40938 356 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 OC90Q02509 493 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 GALNT2Q10471 571 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 KRT81Q14533 505 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 PCBP2Q15366 365 aaKnown RBP eCLIP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 MAPKAPK3Q16644 382 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 IFI16Q16666 785 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 ATP13A4Q4VNC1 1196 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 HMBOX1Q6NT76 420 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 C2orf73Q8N5S3 287 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 LMNTD1Q8N9Z9 388 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 TTC29Q8NA56 475 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 FAM98AQ8NCA5 519 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 MDS2Q8NDY4 140 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 TIGD1Q96MW7 591 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 CCM2Q9BSQ5 444 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 ZNF304Q9HCX3 659 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 PARVAQ9NVD7 372 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 CRIM1Q9NZV1 1036 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 ZNF282Q9UDV7 671 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 TEKT2Q9UIF3 430 aa10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 TDRKHQ9Y2W6 561 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-234ENST00000522227 ASPDHA6ND91 283 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 A6NNC1 897 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 IDSB3KWA1 339 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 RASGRF2O14827 1237 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 EPHB6O15197 1021 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 PDE9AO76083 593 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 ONECUT2O95948 504 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 HEXBP07686 556 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 CD46P15529 392 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 CCNCP24863 283 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 ZBTB17Q13105 803 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 CBLBQ13191 982 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 PTPRCAPQ14761 206 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 GRM7Q14831 915 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 RIPOR1Q6ZS17 1223 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 TMTC1Q8IUR5 882 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 LRRC49Q8IUZ0 686 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 TMEM178AQ8NBL3 297 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 MYRIPQ8NFW9 859 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 OR5AR1Q8NGP9 310 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 SPATA22Q8NHS9 363 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 FLVCR1-AS1Q8TAF5 88 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 DENND1AQ8TEH3 1009 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 AGPAT1Q99943 283 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 UTP23Q9BRU9 249 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 UBP1Q9NZI7 540 aa10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 SNRNP200O75643 2136 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-234ENST00000522227 TLN2Q9Y4G6 2542 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 IGHV3-20A0A0C4DH32 117 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 TMEM191CA6NGB0 347 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 MAN1A2O60476 641 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 SEC24DO94855 1032 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 CD48P09326 243 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 FBLP22087 321 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 PEBP1P30086 187 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 GJC1P36383 396 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 JAM2P57087 298 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 VSX2P58304 361 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 DCAF7P61962 342 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 ACER2Q5QJU3 275 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 SHEQ5VZ18 495 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 NCBP2-AS2Q69YL0 99 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 TAX1BP1Q86VP1 789 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 P3H2Q8IVL5 708 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 CNTD1Q8N815 330 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 SIMC1Q8NDZ2 872 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 OR5M3Q8NGP4 307 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 HM13Q8TCT9 377 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 TFGQ92734 400 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 SCMH1Q96GD3 660 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 Q96MF0 132 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 XPO4Q9C0E2 1151 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 MVB12BQ9H7P6 319 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 AMACRQ9UHK6 382 aa10.48□□□□□ -0.73
CTNNA1-234ENST00000522227 HRNRQ86YZ3 2850 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 RCCD1A6NED2 376 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 GAPDHSO14556 408 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 TFECO14948 347 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 SGTAO43765 313 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 SP1P08047 785 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 UQCRC1P31930 480 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 SHMT2P34897 504 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 ITGA9Q13797 1035 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 BOP1Q14137 746 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 BTBD16Q32M84 506 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 Q5PR19 223 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 WDR53Q7Z5U6 358 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 LIX1LQ8IVB5 337 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 SLC25A41Q8N5S1 370 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 ZNF398Q8TD17 642 aa10.47□□□□□ -0.73
CTNNA1-234ENST00000522227 TMEM125Q96AQ2 219 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms