RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 KNL1Q8NG31 2342 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 OR2A25A4D2G3 310 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 SLC9B1P1A6NJY1 282 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 CPNE3O75131 537 aaKnown RBP9.12□□□□□ -0.95
CLK4-209ENST00000521621 STK17BO94768 372 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 ST6GAL1P15907 406 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 CNTFP26441 200 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 HNMTP50135 292 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 ATP6V0D1P61421 351 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 RHDQ02161 417 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 PPP1R3AQ16821 1122 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 RBM20Q5T481 1227 aaKnown RBP9.12□□□□□ -0.95
CLK4-209ENST00000521621 ZNF425Q6IV72 752 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 LCTLQ6UWM7 567 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 CDHR3Q6ZTQ4 885 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 TRMT10CQ7L0Y3 403 aaKnown RBP9.12□□□□□ -0.95
CLK4-209ENST00000521621 SEC16BQ96JE7 1060 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 SLC45A3Q96JT2 553 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 UBXN10Q96LJ8 280 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 OLFM1Q99784 485 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 C17orf62Q9BQA9 187 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 SPHK1Q9NYA1 384 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
CLK4-209ENST00000521621 SERTAD3Q9UJW9 196 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 SRPK3Q9UPE1 567 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 NFS1Q9Y697 457 aa9.12□□□□□ -0.95
CLK4-209ENST00000521621 GSAPA4D1B5 854 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 E7ENX8 843 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 EBLN1P0CF75 366 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 MPSTP25325 297 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 CRABP2P29373 138 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 CMPK1P30085 196 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 MAGEA12P43365 314 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 ARL4DP49703 201 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 ITGA1P56199 1179 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 TAP2Q03519 686 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PRKG2Q13237 762 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PDAP1Q13442 181 aaKnown RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 BRD3Q15059 726 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 ZNF385CQ66K41 422 aaPredicted RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 FCRL6Q6DN72 434 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 METTL2BQ6P1Q9 378 aaKnown RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 PAQR3Q6TCH7 311 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 CPNE9Q8IYJ1 553 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 TCAIMQ8N3R3 496 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 OR2L3Q8NG85 312 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 OR56A3Q8NH54 315 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 EEF1AKMT1Q8WVE0 214 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 DLG3Q92796 817 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 NACC2Q96BF6 587 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 CYTH2Q99418 400 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 FMO2Q99518 471 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 DHRS4Q9BTZ2 278 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 FAM8A1Q9UBU6 413 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 TDRKHQ9Y2W6 561 aaKnown RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 OARD1Q9Y530 152 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PSAT1Q9Y617 370 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 CYC1P08574 325 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 SSTR1P30872 391 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 GGT5P36269 586 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 GRIA3P42263 894 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 BDKRB1P46663 353 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 ARSFP54793 590 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PRDX1Q06830 199 aaKnown RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 MANEAQ5SRI9 462 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 UBE2R2Q712K3 238 aaPredicted RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 LCA5Q86VQ0 697 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 ZFAND4Q86XD8 727 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 FAM129CQ86XR2 697 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 DSELQ8IZU8 1212 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 GPATCH11Q8N954 259 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 ZNF480Q8WV37 535 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 CATSPER2Q96P56 530 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 TRIM54Q9BYV2 358 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PITHD1Q9GZP4 211 aaPredicted RBP9.11□□□□□ -0.95
CLK4-209ENST00000521621 XKR8Q9H6D3 395 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PPCSQ9HAB8 311 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 TMEM184CQ9NVA4 438 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 SNX7Q9UNH6 387 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 PDE10AQ9Y233 779 aa9.11□□□□□ -0.95
CLK4-209ENST00000521621 NCOR2Q9Y618 2525 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 A8MU76 341 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 TXNDC9O14530 226 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 EZRP15311 586 aaKnown RBP9.1□□□□□ -0.95
CLK4-209ENST00000521621 SERPINB9P50453 376 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 RASA2Q15283 850 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 TRADDQ15628 312 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 ZIC1Q15915 447 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 KCTD19Q17RG1 926 aaPredicted RBP9.1□□□□□ -0.95
CLK4-209ENST00000521621 RHBDD2Q6NTF9 364 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 SBSNQ6UWP8 590 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 NAPRTQ6XQN6 538 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 ADAMTSL2Q86TH1 951 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 PAQR7Q86WK9 346 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 CACNA2D3Q8IZS8 1091 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 ZNF592Q92610 1267 aa9.1□□□□□ -0.95
CLK4-209ENST00000521621 PMEPA1Q969W9 287 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms