RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CCDC42Q96M95 316 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 ZMAT2Q96NC0 199 aaKnown RBP3.96□□□□□ -1.77
CLK4-207ENST00000520909 F2RL3Q96RI0 385 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 DESI2Q9BSY9 194 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.96□□□□□ -1.77
CLK4-207ENST00000520909 IFIH1Q9BYX4 1025 aaKnown RBP3.96□□□□□ -1.77
CLK4-207ENST00000520909 CXCL16Q9H2A7 254 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 C11orf49Q9H6J7 331 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 NHEJ1Q9H9Q4 299 aaPredicted RBP3.96□□□□□ -1.77
CLK4-207ENST00000520909 NOX4Q9NPH5 578 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 SPATS2LQ9NUQ6 558 aaKnown RBP3.96□□□□□ -1.77
CLK4-207ENST00000520909 TRMT1Q9NXH9 659 aaKnown RBP3.96□□□□□ -1.77
CLK4-207ENST00000520909 DPP3Q9NY33 737 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 AIPL1Q9NZN9 384 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 KCNS2Q9ULS6 477 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 DERAQ9Y315 318 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 DAAM1Q9Y4D1 1078 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 CLDN16Q9Y5I7 305 aa3.96□□□□□ -1.77
CLK4-207ENST00000520909 A0A0U1RQF3 1178 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SMIM28A0A1B0GU29 152 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ARL5CA6NH57 179 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 F8VZ95 297 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ZSCAN12O43309 604 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ZIC3O60481 467 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 NBNO60934 754 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 IPO7O95373 1038 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 METTL18O95568 372 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ASS1P00966 412 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 PLEKP08567 350 aaPredicted RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 WEE2P0C1S8 567 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CCDC172P0C7W6 258 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 P4HA1P13674 534 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 KCNE1P15382 129 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 FERP16591 822 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CD58P19256 250 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TNFAIP3P21580 790 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CYLC1P35663 651 aaPredicted RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 HDAC4P56524 1084 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 BRWD1-AS2P59051 145 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 NOP14P78316 857 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 CUL2Q13617 745 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SPA17Q15506 151 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ZBTB6Q15916 424 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 MEA1Q16626 185 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 LRRC26Q2I0M4 334 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ATP13A5Q4VNC0 1218 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ZNF667Q5HYK9 610 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ARHGAP11AQ6P4F7 1023 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 KLHL17Q6TDP4 642 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ALKAL1Q6UXT8 129 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SCARA5Q6ZMJ2 495 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ZNF571Q7Z3V5 609 aaPredicted RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 DEFB128Q7Z7B8 93 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 KIAA1328Q86T90 577 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 VPS36Q86VN1 386 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ECHDC2Q86YB7 292 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 FAM71AQ8IYT1 594 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CCDC170Q8IYT3 715 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CCAR2Q8N163 923 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 TAF4BQ92750 862 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 HPDLQ96IR7 371 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 FAM81BQ96LP2 452 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 RPS6KC1Q96S38 1066 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TSPAN18Q96SJ8 248 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 GAD1Q99259 594 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 GPR88Q9GZN0 384 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 HAUS4Q9H6D7 363 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 APOBEC3GQ9HC16 384 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 OBP2BQ9NPH6 170 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PRDM8Q9NQV8 689 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 RGS18Q9NS28 235 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TAAR2Q9P1P5 351 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TUBGCP4Q9UGJ1 667 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 FBXL5Q9UKA1 691 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ITGA11Q9UKX5 1188 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 UBQLN1Q9UMX0 589 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 BZW2Q9Y6E2 419 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 UMODL1Q5DID0 1318 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 BRCA2P51587 3418 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SIP14410 1827 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 FAM170AA1A519 330 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ASPDHA6ND91 283 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 USP27XA6NNY8 438 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TMCO5BA8MYB1 307 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 EIF3CLB5ME19 914 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 PTGESO14684 152 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CAPN9O14815 690 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 WNT9BO14905 357 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 FFAR2O15552 330 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CALCAP01258 141 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CLTBP09497 229 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CCDC175P0C221 793 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CAPN2P17655 700 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CYP3A5P20815 502 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PPM1AP35813 382 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PRKCIP41743 596 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 MAGEA1P43355 309 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms