RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 ALG1LQ6GMV1 187 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 C16orf87Q6PH81 154 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 CHST15Q7LFX5 561 aaPredicted RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 C11orf74Q86VG3 221 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 OR4A15Q8NGL6 344 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 NUS1Q96E22 293 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 SLC29A3Q9BZD2 475 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 REXO4Q9GZR2 422 aaKnown RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 ZBP1Q9H171 429 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 C3orf18Q9UK00 162 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 MAGEB17A8MXT2 336 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 H7C0S8 307 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 SLC35G4P0C7Q5 338 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 THRBP10828 461 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 LHCGRP22888 699 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 MAT2AP31153 395 aaKnown RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 PRKAG1P54619 331 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 SEC13P55735 322 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 LAPTM4AQ15012 233 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 CMPK2Q5EBM0 449 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 MICU2Q8IYU8 434 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 CBARPQ8N350 705 aaPredicted RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 LMNTD1Q8N9Z9 388 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 PHC3Q8NDX5 983 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 FOXJ1Q92949 421 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 PPCDCQ96CD2 204 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 IRAK4Q9NWZ3 460 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 VAPAQ9P0L0 249 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 RUVBL1Q9Y265 456 aaKnown RBP9.89□□□□□ -0.83
MCF2-209ENST00000520602 GPSM3Q9Y4H4 160 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 COMMD3-BMI1R4GMX3 469 aa9.89□□□□□ -0.83
MCF2-209ENST00000520602 PRSS51A0A1B0GVH4 220 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 TRIM43BA6NCK2 446 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CLIC1O00299 241 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 OR7A17O14581 309 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ERN1O75460 977 aaKnown RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 SCELO95171 688 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CD160O95971 181 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ASLP04424 464 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 HSD17B1P14061 328 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 PTPN5P54829 565 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 GRIK2Q13002 908 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 AAK1Q2M2I8 961 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 RNF111Q6ZNA4 994 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 PARP8Q8N3A8 854 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 OR2A12Q8NGT7 310 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 TRIM43Q96BQ3 446 aaPredicted RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 EID2BQ96D98 161 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 P2RY13Q9BPV8 354 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 IMPAD1Q9NX62 359 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 PTBP2Q9UKA9 531 aaKnown RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 PLAGL1Q9UM63 463 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 WASH3PC4AMC7 463 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 H3BSA7 217 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ZSCAN9O15535 394 aaPredicted RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 IGHA2P01877 340 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CDH1P12830 882 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ENGP17813 658 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 GRK3P35626 688 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CCR2P41597 374 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 IST1P53990 364 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ZXDBP98169 803 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ROR2Q01974 943 aaKnown RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 TRAF3Q13114 568 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 DGCR6Q14129 220 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 SLBPQ14493 270 aaKnown RBP eCLIP9.88□□□□□ -0.83
MCF2-209ENST00000520602 FAM46CQ5VWP2 391 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 KLHDC8BQ8IXV7 354 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 KRT78Q8N1N4 520 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 OR7A2PQ8NGA2 310 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 STARD8Q92502 1023 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 REXO5Q96IC2 774 aaKnown RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 EGLN2Q96KS0 407 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 FERD3LQ96RJ6 166 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 DUSP26Q9BV47 211 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 P2RY12Q9H244 342 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 OR51B5Q9H339 312 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CCDC177Q9NQR7 707 aaPredicted RBP9.88□□□□□ -0.83
MCF2-209ENST00000520602 ATAD3AQ9NVI7 634 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 TRPS1Q9UHF7 1281 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 RPS6KA6Q9UK32 745 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 VPS4AQ9UN37 437 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 LRRC37A2A6NM11 1700 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 TRBV23OR9-2A0A075B6M9 112 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 A0A0G2JN53 185 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 SNAP29O95721 258 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CEBPBP17676 345 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 PRPS1L1P21108 318 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 OCA2Q04671 838 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 GRM2Q14416 872 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 C2orf27AQ580R0 203 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 PLEKHS1Q5SXH7 462 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 NOXRED1Q6NXP6 359 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 TMEM150AQ86TG1 271 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 C17orf64Q86WR6 236 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 ZDHHC21Q8IVQ6 265 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 MARVELD2Q8N4S9 558 aa9.88□□□□□ -0.83
MCF2-209ENST00000520602 APIPQ96GX9 242 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms