RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SNX10Q9Y5X0 201 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 A0A1B0GVC2 190 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 BHMG1C9JSJ3 638 aaPredicted RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 M0R036 132 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 FPGTO14772 594 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 PMM2O15305 246 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 PCCBP05166 539 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 RAB39AQ14964 217 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 BTBD16Q32M84 506 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 POMZP3Q6PJE2 187 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ARSKQ6UWY0 536 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 RBM15BQ8NDT2 890 aaKnown RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF347Q96SE7 839 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 GRHL1Q9NZI5 618 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 A0A1B0GVM2 712 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 TCAF2A6NFQ2 919 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 NFATC1O95644 943 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 PGRP06401 933 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF45Q02386 682 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 TGFBIQ15582 683 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC30A6Q6NXT4 461 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 LINGO4Q6UY18 593 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 CIR1Q86X95 450 aaPredicted RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ZSCAN4Q8NAM6 433 aaPredicted RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 GATAD2BQ8WXI9 593 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 AP2M1Q96CW1 435 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 JSRP1Q96MG2 331 aaPredicted RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 AP2A2O94973 939 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 UROSP10746 265 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 MATN1P21941 496 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 PBX3P40426 434 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ILF3Q12906 894 aaKnown RBP eCLIP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 LARS2Q15031 903 aaKnown RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC9B1Q4ZJI4 515 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 SPATA22Q8NHS9 363 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 PHPT1Q9NRX4 125 aaPredicted RBP11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC39A1Q9NY26 324 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 ASB3Q9Y575 518 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3DA0A087WVF3 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3IA0A087WXS9 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3EA0A087X179 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3KA0A087X1G2 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 HYKKA2RU49 373 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3FA6NER0 549 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3LB9A6J9 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3HP0C7X1 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 OR3A3P47888 321 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 OR3A2P47893 321 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 CD83Q01151 205 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 CLCQ05315 142 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TAF1AQ15573 450 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 CYP1B1Q16678 543 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC10A6Q3KNW5 377 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3GQ6DHY5 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3CQ6IPX1 549 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 DCP2Q8IU60 420 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D3Q8IZP1 549 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 OR2T34Q8NGX1 318 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 OR2T3Q8NH03 318 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF431Q8TF32 576 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 NMUR2Q9GZQ4 415 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 KAT8Q9H7Z6 458 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ANXA2P2A6NMY6 339 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 RASGRP1O95267 797 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 PRAMEF1O95521 474 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 IFNA21P01568 189 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 PRNPP04156 253 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ANXA2P07355 339 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF823P16415 610 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ASMTP46597 345 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 CAPZA1P52907 286 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TMBIM6P55061 237 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 SPPL2CQ8IUH8 684 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TBC1D15Q8TC07 691 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 NTPCRQ9BSD7 190 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 WRAP73Q9P2S5 460 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 MAN2B2Q9Y2E5 1009 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 FCF1Q9Y324 198 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 SAGP10523 405 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 CYP4B1P13584 511 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ARCN1P48444 511 aaKnown RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 NPY5RQ15761 445 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 RFTN2Q52LD8 501 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 LDB1Q86U70 411 aaPredicted RBP11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 TMEM192Q8IY95 271 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 GALNT11Q8NCW6 608 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 ATP6V1C2Q8NEY4 427 aa11.86□□□□□ -0.51
ERGIC1-208ENST00000520399 CCDC107Q8WV48 283 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms