RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TTLL10Q6ZVT0 673 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 RRAGAQ7L523 313 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 CRLF3Q8IUI8 442 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 PASD1Q8IV76 773 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 GRAMD1CQ8IYS0 662 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 GPR135Q8IZ08 494 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 RTL3Q8N8U3 475 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 LMO3Q8TAP4 145 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 ZNF606Q8WXB4 792 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 SMPDL3BQ92485 455 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 EID2BQ96D98 161 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 CFAP57Q96MR6 1250 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 CNPPD1Q9BV87 410 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 LRRC19Q9H756 370 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 NOD2Q9HC29 1040 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 TXLNGQ9NUQ3 528 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 FANCLQ9NW38 375 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 C6orf203Q9P0P8 240 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 C3orf18Q9UK00 162 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 TRAF3IP3Q9Y228 551 aa6.38□□□□□ -1.39
CTNNA1-216ENST00000519489 FFAR3O14843 346 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 KMOO15229 486 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 GPR42O15529 346 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 NME2P1O60361 137 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 LETM1O95202 739 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 VENTXO95231 258 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 PGLSO95336 258 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 TMIGD3P0DMS9 266 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 CYP2A6P11509 494 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 MTHFD1P11586 935 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 NME2P22392 152 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 NR2F2P24468 414 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 NEK4P51957 841 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 AP1S1P61966 158 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 YWHAEP62258 255 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 NSUN2Q08J23 767 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 SETDB1Q15047 1291 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 LIPNQ5VXI9 398 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 ZNF585AQ6P3V2 769 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 UNC5DQ6UXZ4 953 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 ELOA2Q8IYF1 753 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 UMODL1-AS1Q8N2C9 162 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 DNAJC22Q8N4W6 341 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 CCDC185Q8N715 623 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 PAF1Q8N7H5 531 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 FLVCR1-AS1Q8TAF5 88 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 STT3BQ8TCJ2 826 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 TBC1D31Q96DN5 1066 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 PLCD4Q9BRC7 762 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 SHARPINQ9H0F6 387 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 DEFB127Q9H1M4 99 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 KIR3DX1Q9H7L2 352 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 TRIM39Q9HCM9 518 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 IMP3Q9NV31 184 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 CNTN6Q9UQ52 1028 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 LIPGQ9Y5X9 500 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 MAU2Q9Y6X3 613 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 ZNF407Q9C0G0 2248 aa6.37□□□□□ -1.39
CTNNA1-216ENST00000519489 IGHV3-20A0A0C4DH32 117 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 A0A1B0GX78 115 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 TFECO14948 347 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 FZD6O60353 706 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 PALMO75781 387 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 GOSR1O95249 250 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 UQCRHP07919 91 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ZGLP1P0C6A0 271 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 MYBL2P10244 700 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 KRT13P13646 458 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 HLA-DPA1P20036 260 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 BMP5P22003 454 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 PRKCIP41743 596 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 PAPOLAP51003 745 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ATP5J2P56134 94 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 VSX2P58304 361 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 YBEYP58557 167 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 DSC2Q02487 901 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC10A7Q0GE19 358 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 MEA1Q16626 185 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 MAPKAPK3Q16644 382 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 PARP15Q460N3 678 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ACBD5Q5T8D3 534 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ARMC6Q6NXE6 501 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ARHGAP11AQ6P4F7 1023 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 LRRTM4Q86VH4 590 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ARHGAP12Q8IWW6 846 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 C19orf47Q8N9M1 422 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 TMEM178AQ8NBL3 297 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 C1orf131Q8NDD1 294 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 UTP23Q9BRU9 249 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC39A8Q9C0K1 460 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 ZNF700Q9H0M5 742 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 STOX2Q9P2F5 926 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 LPAR3Q9UBY5 353 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 TRIM33Q9UPN9 1127 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 WIF1Q9Y5W5 379 aa6.36□□□□□ -1.39
CTNNA1-216ENST00000519489 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 DNAH9Q9NYC9 4486 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 RAI1Q7Z5J4 1906 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms