RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 LEMD1Q68G75 181 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CDC73Q6P1J9 531 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 KRT77Q7Z794 578 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HIPK1Q86Z02 1210 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LYPD1Q8N2G4 141 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LINC01006Q8NI28 216 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 SAAL1Q96ER3 474 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 FAM81BQ96LP2 452 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 DGAT2Q96PD7 388 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HGH1Q9BTY7 390 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 SPHK1Q9NYA1 384 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 KLK12Q9UKR0 248 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CAMK2AQ9UQM7 478 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 IGHV3-16A0A0C4DH30 117 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 C17orf51A8MQB3 221 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PANO1I0J062 215 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TO15178 435 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TEX28O15482 410 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 WISP3O95389 354 aaPredicted RBP0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 IFIT2P09913 472 aaKnown RBP0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 MYOGP15173 224 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PTGER4P35408 488 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 RPL34P49207 117 aaKnown RBP0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NDUFV3P56181 108 aaKnown RBP0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 ARL4CP56559 192 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 WNT4P56705 351 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 ABCE1P61221 599 aaKnown RBP0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 ITGA7Q13683 1181 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 UGT3A1Q6NUS8 523 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 C1orf228Q6PIY5 440 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 RNF138Q8WVD3 245 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 ITLN1Q8WWA0 313 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 APOPT1Q96IL0 206 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 DACH2Q96NX9 599 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NUDCD1Q96RS6 583 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 MAP7D2Q96T17 732 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 LPAR4Q99677 370 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 URM1Q9BTM9 101 aaKnown RBP0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NYXQ9GZU5 481 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 SCPEP1Q9HB40 452 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NTN4Q9HB63 628 aa0.96□□□□□ -2.26
RNU6-1271P-201ENST00000517049 MYO10Q9HD67 2058 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PINLYPA6NC86 204 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 VENTXO95231 258 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 UMPSP11172 480 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 AOC1P19801 751 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 CHKAP35790 457 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 LBX1P52954 281 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 KRTAP12-3P60328 96 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 SNRPEP62304 92 aaKnown RBP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TRIM14Q14142 442 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 FRG1Q14331 258 aaKnown RBP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 DPCR1Q3MIW9 517 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TIMM50Q3ZCQ8 353 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PHLDA2Q53GA4 152 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TDRD5Q8NAT2 981 aaKnown RBP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 OR4Q3Q8NH05 313 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 SVIPQ8NHG7 77 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TBC1D16Q8TBP0 767 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 SPPL2AQ8TCT8 520 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 FAM122AQ96E09 287 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NR1H4Q96RI1 486 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 BTBD10Q9BSF8 475 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PLCB1Q9NQ66 1216 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 VNN3Q9NY84 501 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 CDC42BPBQ9Y5S2 1711 aa0.95□□□□□ -2.26
RNU6-1271P-201ENST00000517049 IGHV3-20A0A0C4DH32 117 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 A0A1W2PQF6 199 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 HYKKA2RU49 373 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 C2orf81A6NN90 581 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 ENO4A6NNW6 628 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 OGG1O15527 345 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TLX2O43763 284 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 KRT33AO76009 404 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 GH2P01242 217 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PRKAR1AP10644 381 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NR2C1P13056 603 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 CDH3P22223 829 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 CSTF3Q12996 717 aaKnown RBP0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 SPDYCQ5MJ68 293 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 OR52B6Q8NGF0 335 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 C2orf48Q96LS8 159 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 DDOQ99489 341 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 HNRNPABQ99729 332 aaKnown RBP0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 GPR63Q9BZJ6 419 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 FAM207AQ9NSI2 230 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 GEMIN8Q9NWZ8 242 aaKnown RBP0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 C19orf25Q9UFG5 118 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 CLEC4EQ9ULY5 219 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 PTCH1Q13635 1447 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 MEGF6O75095 1541 aa0.94□□□□□ -2.26
RNU6-1271P-201ENST00000517049 ARHGEF33A8MVX0 844 aa0.93□□□□□ -2.26
RNU6-1271P-201ENST00000517049 TXNL1O43396 289 aa0.93□□□□□ -2.26
RNU6-1271P-201ENST00000517049 NDUFS3O75489 264 aa0.93□□□□□ -2.26
RNU6-1271P-201ENST00000517049 LYPD3O95274 346 aa0.93□□□□□ -2.26
RNU6-1271P-201ENST00000517049 WDPCPO95876 746 aa0.93□□□□□ -2.26
RNU6-1271P-201ENST00000517049 MT-ND1P03886 318 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms