RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 MRPS2Q9Y399 296 aaKnown RBP7.92□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ACANP16112 2415 aa7.92□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TCRBV7S3A2A0A539 114 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 FITM1A5D6W6 292 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 KLHL33A6NCF5 533 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ISM1B1AKI9 464 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 C9J4A7 227 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 MATN2O00339 956 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 IFRD1O00458 451 aaPredicted RBP7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SUN1O94901 812 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SLCO2B1O94956 709 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CD9P21926 228 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SHMT2P34897 504 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SOX11P35716 441 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 FOLR3P41439 243 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 NSG1P42857 185 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 BDKRB1P46663 353 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 RRADP55042 308 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 KCNK10P57789 538 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TPM4P67936 248 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 HSPA14Q0VDF9 509 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SKOR2Q2VWA4 1001 aaPredicted RBP7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 VWA2Q5GFL6 755 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CTSL3PQ5NE16 218 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TSTD2Q5T7W7 516 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 PRAMEF13Q5VWM6 474 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 B3GNTL1Q67FW5 361 aaPredicted RBP7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CYB5D1Q6P9G0 228 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CES3Q6UWW8 571 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 LINC00696Q6ZRV3 163 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 RAB43Q86YS6 212 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ST6GALNAC3Q8NDV1 305 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 OR2A1Q8NGT9 310 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CFAP61Q8NHU2 1237 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 PROKR1Q8TCW9 393 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 FAR1Q8WVX9 515 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 BIRC8Q96P09 236 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SLC30A3Q99726 388 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 DESI2Q9BSY9 194 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SLC26A1Q9H2B4 701 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 FANCEQ9HB96 536 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CHRAC1Q9NRG0 131 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CUTCQ9NTM9 273 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 MED16Q9Y2X0 877 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 AP1M2Q9Y6Q5 423 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 PCM1Q15154 2024 aa7.91□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CFAP99D6REC4 459 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 P2RX6O15547 441 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CBFA2T2O43439 604 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 FOXS1O43638 330 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 MAN1A2O60476 641 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 DNAJB6O75190 326 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 JRKO75564 520 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 STATHP02808 62 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 RALBP11234 206 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 COX6A1P12074 109 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 AGXTP21549 392 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ITGA3P26006 1051 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 NMBRP28336 390 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TNFRSF8P28908 595 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CARSP49589 748 aaKnown RBP7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 RAB28P51157 221 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 RWDD2BP57060 319 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 KRTAP10-9P60411 292 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 KLC1Q07866 573 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 GBX1Q14549 363 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ITIH4Q14624 930 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 KIR2DS3Q14952 304 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ZRSR2Q15696 482 aaKnown RBP7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 SYT16Q17RD7 645 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ZXDCQ2QGD7 858 aaPredicted RBP7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 PRTGQ2VWP7 1150 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ODF2Q5BJF6 829 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 WASHC2DQ5SRD0 308 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TLDC1Q6P9B6 456 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 GAS2L3Q86XJ1 694 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CNGA4Q8IV77 575 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 GPR135Q8IZ08 494 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 AGGF1Q8N302 714 aaeCLIP7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 AMER3Q8N944 861 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 OR2L8Q8NGY9 312 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 DNAJB14Q8TBM8 379 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 HEXDCQ8WVB3 486 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 C1orf54Q8WWF1 131 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 FAM136AQ96C01 138 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CCDC138Q96M89 665 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 C5orf34Q96MH7 638 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 NPAS2Q99743 824 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 WDR77Q9BQA1 342 aaPredicted RBP7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TSPY26PQ9H489 355 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 LRRC40Q9H9A6 602 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 TREX1Q9NSU2 369 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 KLK4Q9Y5K2 254 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 CAPN6Q9Y6Q1 641 aa7.9□□□□□ -1.14
SCARNA20.3-201ENST00000516913 HRNRQ86YZ3 2850 aaPredicted RBP7.9□□□□□ -1.15
SCARNA20.3-201ENST00000516913 AKAP6Q13023 2319 aa7.89□□□□□ -1.15
SCARNA20.3-201ENST00000516913 IGLV3-12A0A075B6K2 115 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms