RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 MMABQ96EY8 250 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 UBXN10Q96LJ8 280 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LPAR4Q99677 370 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HNRNPABQ99729 332 aaKnown RBP0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LBHD1Q9BQE6 289 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 FUZQ9BT04 418 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 OR2B2Q9GZK3 357 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 VN1R1Q9GZP7 353 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CHMP1AQ9HD42 196 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PLCB1Q9NQ66 1216 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF275Q9NSD4 429 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CLEC5AQ9NY25 188 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 NLGN3Q9NZ94 848 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TSPYL4Q9UJ04 414 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SARDHQ9UL12 918 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MKLN1Q9UL63 735 aa0.68□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ENO4A6NNW6 628 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TRIM49D1C9J1S8 452 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 K7EQD1 137 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SCO2O43819 266 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LYPD3O95274 346 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ACSL3O95573 720 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GP1BBP13224 206 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 DARSP14868 501 aaKnown RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 VEGFAP15692 232 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PTPN3P26045 913 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ELAVL4P26378 380 aaKnown RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PKLRP30613 574 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GNALP38405 381 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MNDAP41218 407 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SLC15A1P46059 708 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GALCP54803 685 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 NDUFV3P56181 108 aaKnown RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SRPXP78539 464 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LRRC63Q05C16 580 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TMEM132DQ14C87 1099 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HERC3Q15034 1050 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PTPN14Q15678 1187 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TIMM50Q3ZCQ8 353 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SLC25A53Q5H9E4 307 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SPECC1Q5M775 1068 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ACSM2BQ68CK6 577 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF776Q68DI1 518 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LEMD1Q68G75 181 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C3P1Q6ZMU1 363 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 BBS12Q6ZW61 710 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ARID3BQ8IVW6 561 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 AVL9Q8NBF6 648 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HJURPQ8NCD3 748 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 VPS37AQ8NEZ2 397 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TBC1D16Q8TBP0 767 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SIPA1Q96FS4 1042 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 OVOL2Q9BRP0 275 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 HGH1Q9BTY7 390 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CHRDL1Q9BU40 450 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C1QTNF1Q9BXJ1 281 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GPR63Q9BZJ6 419 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CCSER1Q9C0I3 900 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SP140LQ9H930 580 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MARCH7Q9H992 704 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ARNT2Q9HBZ2 717 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RIC8AQ9NPQ8 531 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RRP7BPQ9NSQ0 103 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF319Q9P2F9 582 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZNF282Q9UDV7 671 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RSPH14Q9UHP6 348 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 RIPOR2Q9Y4F9 1068 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ZFP37Q9Y6Q3 630 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PIAS3Q9Y6X2 628 aa0.67□□□□□ -2.3
RNU6-1258P-201ENST00000516911 IGKV2-28A0A075B6P5 120 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TMEM8BA6NDV4 472 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SHISA7A6NL88 538 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 C17orf51A8MQB3 221 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SNURFLB1AK76 121 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LDLRAD4O15165 306 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SURF4O15260 269 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TEX28O15482 410 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SSX4O60224 188 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 SEC14L2O76054 403 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ACTL6AO96019 429 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 IGKV2D-28P01615 120 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 NR2C1P13056 603 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 LMO2P25791 158 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 NMBRP28336 390 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CHRNA3P32297 505 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CCR3P51677 355 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 GPR143P51810 404 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 B3GALT5-AS1P59052 145 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 ERVPABLB-1P60509 514 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 OLR1P78380 273 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 PRKCEQ02156 737 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 MECOMQ03112 1051 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 CSTF3Q12996 717 aaKnown RBP0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 KIAA0141Q14154 515 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 EIF4A2Q14240 407 aaKnown RBP0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TAF12Q16514 161 aa0.66□□□□□ -2.3
RNU6-1258P-201ENST00000516911 TMEM44Q2T9K0 475 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms