RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 KTI12Q96EK9 354 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 MCCC1Q96RQ3 725 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 HNRNPABQ99729 332 aaKnown RBP-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 NKX3-1Q99801 234 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 RTKNQ9BST9 563 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 EIF2AQ9BY44 585 aaKnown RBP-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 NUP62CLQ9H1M0 184 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 UBQLN3Q9H347 655 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 MARCH7Q9H992 704 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 TMEM9Q9P0T7 183 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 PEMTQ9UBM1 199 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 ITGA11Q9UKX5 1188 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 CLCA3PQ9Y6N3 262 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 ARHGAP21Q5T5U3 1957 aa-0.57□□□□□ -2.5
RNU6-557P-201ENST00000516842 DSTQ03001 7570 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 EIF4E1BA6NMX2 242 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ALG1L2C9J202 215 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 PRSS46E5RG02 174 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 K7EQG2 157 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ZNF749O43361 778 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ECE2O60344 883 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 N4BP1O75113 896 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 GPC4O75487 556 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 RHBDL1O75783 438 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ZBED1O96006 694 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 DARSP14868 501 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 CD22P20273 847 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 MAGP20916 626 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 HSD3B2P26439 372 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 CDH5P33151 784 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 NUDT1P36639 197 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 RPL21P46778 160 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 PRIM2P49643 509 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ARSEP51690 589 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ZNF75DP51815 510 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 GOLGA8FQ08AF8 430 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 UNC119Q13432 240 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 TMEM132DQ14C87 1099 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 HERC3Q15034 1050 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 TAB1Q15750 504 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 MPPED2Q15777 294 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 TAF9Q16594 264 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 PTPROQ16827 1216 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ARHGAP29Q52LW3 1261 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 RAB11FIP2Q7L804 512 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 HMGN2P46Q86SG4 172 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 GATAD2AQ86YP4 633 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ZNF695Q8IW36 515 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 CCDC117Q8IWD4 279 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 ARHGAP12Q8IWW6 846 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 RPAP2Q8IXW5 612 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 CERS5Q8N5B7 392 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 AVL9Q8NBF6 648 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SLC38A9Q8NBW4 561 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 OR10G7Q8NGN6 311 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 OR1J2Q8NGS2 313 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SREK1Q8WXA9 508 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SMARCD2Q92925 531 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 EYA3Q99504 573 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 NUP85Q9BW27 656 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 OR2B2Q9GZK3 357 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 GLT8D2Q9H1C3 349 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SLA2Q9H6Q3 261 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SLC28A3Q9HAS3 691 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 PCDH12Q9NPG4 1184 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 C1orf112Q9NSG2 853 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 NDUFAF4Q9P032 175 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 PDP2Q9P2J9 529 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 STK39Q9UEW8 545 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 OR14J1Q9UGF5 321 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 LNPEPQ9UIQ6 1025 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 THRAP3Q9Y2W1 955 aaKnown RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SPIN1Q9Y657 262 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 EID1Q9Y6B2 187 aa-0.58□□□□□ -2.5
RNU6-557P-201ENST00000516842 SHANK1Q9Y566 2161 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 GTF3C1Q12789 2109 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 COLCA2A8K830 154 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 A8MX80 341 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 SNURFLB1AK76 121 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 E7EVH7 732 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 TMEM189-UBE2V1I3L0A0 370 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 ACKR2O00590 384 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 ZBTB43O43298 467 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 RBBP9O75884 186 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 CDK2AP2O75956 126 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 HRGP04196 525 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 RPL35AP18077 110 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 POU1F1P28069 291 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 RPS10P46783 165 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 RBM5P52756 815 aaKnown RBP eCLIP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 NDST2P52849 883 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 ADARB1P78563 741 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 CXCL6P80162 114 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 UBE2V1Q13404 147 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 PDE1CQ14123 709 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 HERPUD1Q15011 391 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 RNPS1Q15287 305 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 PHLDA2Q53GA4 152 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 CYB5R2Q6BCY4 276 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms