RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 BHLHA9Q7RTU4 235 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 RNF144BQ7Z419 303 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 SCD5Q86SK9 330 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 NOP9Q86U38 636 aaKnown RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 NT5DC3Q86UY8 548 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 BPHLQ86WA6 291 aaPredicted RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 TREML1Q86YW5 311 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 TMEM126BQ8IUX1 230 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 GSPT2Q8IYD1 628 aaKnown RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 GOLGA6L1Q8N7Z2 621 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 TP53I13Q8NBR0 393 aaPredicted RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC30A5Q8TAD4 765 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 UBA3Q8TBC4 463 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 FNIP1Q8TF40 1166 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 RNF139Q8WU17 664 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 KLHL6Q8WZ60 621 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 PLD4Q96BZ4 506 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 C1orf74Q96LT6 269 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 PCMTD1Q96MG8 357 aaPredicted RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 SERPINB11Q96P15 392 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 QRFPRQ96P65 431 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC6A7Q99884 636 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 AGPAT1Q99943 283 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 RHOXF2Q9BQY4 288 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 SYT11Q9BT88 431 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 APOOQ9BUR5 198 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 ISCUQ9H1K1 167 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 SYNCQ9H7C4 482 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 NMUR1Q9HB89 426 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 FGF22Q9HCT0 170 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 MRPL47Q9HD33 250 aaKnown RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 DYRK4Q9NR20 520 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNHIT6Q9NWK9 470 aaKnown RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 MYO1AQ9UBC5 1043 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 TRIM10Q9UDY6 481 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC12A6Q9UHW9 1150 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 NAGPAQ9UK23 515 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 HS3ST2Q9Y278 367 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 TLR6Q9Y2C9 796 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 PTRH2Q9Y3E5 179 aaKnown RBP3□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM215AQ9Y5M1 114 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM169AQ9Y6X4 670 aa3□□□□□ -1.93
SCARNA13-201ENST00000516672 A0A1W2PQH9 124 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 HYKKA2RU49 373 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CTAGE15A4D2H0 777 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 ANKRD62A6NC57 917 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 OR5H15A6NDH6 313 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 RCCD1A6NED2 376 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 TMEM202A6NGA9 273 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 LRRC53A6NM62 1247 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 SIGLEC16A6NMB1 481 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 KCNU1A8MYU2 1149 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 E5RJQ4 531 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 MATN2O00339 956 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 DVL2O14641 736 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 EPHB6O15197 1021 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 TSPAN6O43657 245 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 KIF5CO60282 957 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 PIP5K1CO60331 668 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 MAN1A2O60476 641 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CDC40O60508 579 aaKnown RBP eCLIP2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 HCN1O60741 890 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 TBL1XO60907 577 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 DAB1O75553 588 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CDK2AP2O75956 126 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 IGLV3-25P01717 112 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 ATP1A1P05023 1023 aaKnown RBP2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 FYNP06241 537 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CTAGE8P0CG41 777 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 KRT3P12035 628 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 ADRB3P13945 408 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 FOLR1P15328 257 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CHRNB2P17787 502 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 NELFEP18615 380 aaKnown RBP2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 TNFAIP3P21580 790 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CCR1P32246 355 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 HTR7P34969 479 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 SOX11P35716 441 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 PTPN9P43378 593 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 TNNT3P45378 269 aaPredicted RBP2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CCT5P48643 541 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 KLK7P49862 253 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 NEK3P51956 506 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF135P52742 658 aaPredicted RBP2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 FOXL2P58012 376 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 DSCR9P59020 149 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 KLHL30Q0D2K2 578 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 ADIGQ0VDE8 80 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 PTP4A2Q12974 167 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC12A1Q13621 1099 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 TCEAL1Q15170 157 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 IRF4Q15306 451 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC18A3Q16572 532 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 CLEC16AQ2KHT3 1053 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 SPRED3Q2MJR0 410 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 ASTE1Q2TB18 679 aaPredicted RBP2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 C11orf91Q3C1V1 193 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 C5orf22Q49AR2 442 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 PTPN20Q4JDL3 420 aa2.99□□□□□ -1.93
SCARNA13-201ENST00000516672 FSCBQ5H9T9 825 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms