RNA–Protein interactions for RNA: ENST00000516564.1

RNU6-358P-201, Transcript of RNA, U6 small nuclear 358, pseudogene, humanhuman

BASIC

Gene RNU6-358P, Length 75 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-358P-201ENST00000516564 LRRC59Q96AG4 307 aaKnown RBP2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 TBATAQ96M53 351 aa2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 C1orf147Q96MC9 270 aaPredicted RBP2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 SPAG5Q96R06 1193 aa2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 MIS12Q9H081 205 aa2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 FAM49AQ9H0Q0 323 aaPredicted RBP2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 KCNK15Q9H427 330 aa2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 IRAK4Q9NWZ3 460 aa2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 STUB1Q9UNE7 303 aa2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 COL4A4P53420 1690 aaPredicted RBP2.43□□□□□ -2.02
RNU6-358P-201ENST00000516564 C2orf81A6NN90 581 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 TFECO14948 347 aaPredicted RBP2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 MITFO75030 526 aaPredicted RBP2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 MED24O75448 989 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 LAMP2P13473 410 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 PDHA2P29803 388 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 FCHO2Q0JRZ9 810 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 G3BP1Q13283 466 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 TMEM95Q3KNT9 176 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 FAM166AQ6J272 317 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 UGT3A1Q6NUS8 523 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 TMCO3Q6UWJ1 677 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 VITQ6UXI7 678 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 Q6ZVH6 145 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 LDB1Q86U70 411 aaPredicted RBP2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 AACSQ86V21 672 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 FGFRL1Q8N441 504 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 SUMF1Q8NBK3 374 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 NPRL2Q8WTW4 380 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 CNRIP1Q96F85 164 aaPredicted RBP2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 C7orf26Q96N11 449 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 ITPAQ9BY32 194 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 HRH4Q9H3N8 390 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 TUBB1Q9H4B7 451 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 TMEM98Q9Y2Y6 226 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 GRIP1Q9Y3R0 1128 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 STYXL1Q9Y6J8 313 aa2.42□□□□□ -2.02
RNU6-358P-201ENST00000516564 LNP1A1A4G5 178 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 LRRC72A6NJI9 287 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 GALR3O60755 368 aaPredicted RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 HMGB1P09429 215 aaKnown RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 PTPN3P26045 913 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 CSTF2P33240 577 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 LMOD3Q0VAK6 560 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 NR1D2Q14995 579 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 NOTUMQ6P988 496 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 TIPARPQ7Z3E1 657 aaKnown RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 HAUS6Q7Z4H7 955 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 FAM131BQ86XD5 332 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 ZFAND4Q86XD8 727 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 GPD1LQ8N335 351 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 FBXO39Q8N4B4 442 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 SCFD2Q8WU76 684 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 CNOT6LQ96LI5 555 aaKnown RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 NEK1Q96PY6 1258 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 LGMNQ99538 433 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 KIFC3Q9BVG8 833 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 SLC26A6Q9BXS9 759 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 FTOQ9C0B1 505 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 TBC1D17Q9HA65 648 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 GPN1Q9HCN4 374 aaPredicted RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 C9orf78Q9NZ63 289 aaPredicted RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 THAP10Q9P2Z0 257 aaPredicted RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 ORC3Q9UBD5 711 aaPredicted RBP2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 WIPI2Q9Y4P8 454 aa2.41□□□□□ -2.02
RNU6-358P-201ENST00000516564 ZNF840PA6NDX5 716 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 ANKUB1A6NFN9 424 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 CDRT15L2A8MXV6 281 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 SNURFLB1AK76 121 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 PHF1O43189 567 aaPredicted RBP2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 TBX18O95935 607 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 HPP00738 406 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 SMIM18P0DKX4 95 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 VPREB1P12018 145 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 KLK2P20151 261 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 ZBTB25P24278 435 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 ARL3P36405 182 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 CXCL9Q07325 125 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 CDH18Q13634 790 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 FAM189A2Q15884 450 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 SLC35D3Q5M8T2 416 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 SNX30Q5VWJ9 437 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 CDHR3Q6ZTQ4 885 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 ZBED8Q8IZ13 594 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 IL17REQ8NFR9 667 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 USP6NLQ92738 828 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 DHX58Q96C10 678 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 ZNF597Q96LX8 424 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 LINC00167Q96N53 147 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 MAP3K3Q99759 626 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 CHCHD5Q9BSY4 110 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 SPATC1LQ9H0A9 340 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 B4GALT7Q9UBV7 327 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 C19orf25Q9UFG5 118 aaPredicted RBP2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 PLAGL1Q9UM63 463 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 TRIM17Q9Y577 477 aa2.4□□□□□ -2.03
RNU6-358P-201ENST00000516564 TDRD9Q8NDG6 1382 aaKnown RBP2.39□□□□□ -2.03
RNU6-358P-201ENST00000516564 FPGTO14772 594 aa2.39□□□□□ -2.03
RNU6-358P-201ENST00000516564 SNAP91O60641 907 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms