RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 HACL1Q9UJ83 578 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ERRFI1Q9UJM3 462 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXW11Q9UKB1 542 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RAB21Q9UL25 225 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MKLN1Q9UL63 735 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNPEPQ9ULA0 475 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTUS1Q9ULD2 1270 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RIMKLBQ9ULI2 386 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NDRG4Q9ULP0 352 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC45A2Q9UMX9 530 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PROCRQ9UNN8 238 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ST3GAL5Q9UNP4 418 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MGAT4BQ9UQ53 548 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF148Q9UQR1 794 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DTX4Q9Y2E6 619 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CARD8Q9Y2G2 431 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 STK38LQ9Y2H1 464 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF510Q9Y2H8 683 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPS17Q9Y2R5 130 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM96BQ9Y3D0 163 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 N6AMT1Q9Y5N5 214 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAU2Q9Y6X3 613 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPACA6W5XKT8 324 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 COL11A2P13942 1736 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGEF40Q8TER5 1519 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASTN2O75129 1339 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL16Q14005 1332 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAP3K19Q56UN5 1328 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA31A1Q5TZJ5 1347 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA31A5Q5VU36 1347 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TTC41PQ6P2S7 1318 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA31A7Q8IWB4 1347 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CENPJQ9HC77 1338 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KAT6AQ92794 2004 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DISP3Q9P2K9 1392 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FER1L4A9Z1Z3 1794 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A075B6Q4 140 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A096LPK6 155 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0A6YYC8 382 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0B4J293 547 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0U1RQJ8 604 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 C11orf97A0A1B0GVM6 126 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMIM35A0A1B0GVV1 85 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERTM2A0A1B0GWG4 89 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PPM1 405 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PPQ1 181 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PR77 199 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 KANSL1LA0AUZ9 987 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ILVBLA1L0T0 632 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 C1orf226A1L170 272 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MACROD2A1Z1Q3 448 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TARSL2A2RTX5 802 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CPED1A4D0V7 1026 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MBLAC1A4D2B0 266 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GOLGA8OA6NCC3 632 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAGEA13PA6NCF6 341 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR6C74A6NCV1 312 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 HELTA6NFD8 242 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MFSD2BA6NFX1 497 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NEMP2A6NFY4 417 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 WIPF3A6NGB9 483 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CBY3A6NI87 242 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZSCAN5BA6NJL1 495 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC3CA6NJW4 275 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACOD1A6NK06 481 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CGB1A6NKQ9 187 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 DUXAA6NLW8 204 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF716A6NP11 495 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FOXO6A8MYZ6 492 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM157AC9JC47 383 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSBP1L1C9JCN9 74 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLRF2D3W0D1 207 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MCIDASD6RGH6 385 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPIPB11E5RHQ5 1161 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 E5RJQ4 531 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPECC1L-ADORA2AF8WAN1 911 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GOLGA8NF8WBI6 632 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 H0YGN5 161 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 H3BMM5 538 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 GOLGA8SH3BPF8 625 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 RBAK-RBAKDNI3L0D1 243 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 I3L1I5 382 aaPredicted RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 TLR4O00206 839 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LGALS8O00214 317 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 PTGESO14684 152 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHEK1O14757 476 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 HS3ST1O14792 307 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CTDSPLO15194 276 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHADO15335 359 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC16A5O15375 505 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAGEB2O15479 319 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 YKT6O15498 198 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 OGG1O15527 345 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF113AO15541 343 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNMTO43148 476 aaKnown RBP0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 FLRT2O43155 660 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 ST8SIA3O43173 380 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRTM2O43300 516 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 MED7O43513 233 aa0.56□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPRY2O43597 315 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms