RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 LIX1LQ8IVB5 337 aa11.22□□□□□ -0.61
SMAD5-210ENST00000515005 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
SMAD5-210ENST00000515005 CCM2Q9BSQ5 444 aa11.22□□□□□ -0.61
SMAD5-210ENST00000515005 BDH2Q9BUT1 245 aa11.22□□□□□ -0.61
SMAD5-210ENST00000515005 TP63Q9H3D4 680 aaPredicted RBP11.22□□□□□ -0.61
SMAD5-210ENST00000515005 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
SMAD5-210ENST00000515005 ZNF282Q9UDV7 671 aaPredicted RBP11.22□□□□□ -0.61
SMAD5-210ENST00000515005 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 CHRM5P08912 532 aaPredicted RBP11.21□□□□□ -0.61
SMAD5-210ENST00000515005 SERPINB6P35237 376 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 GRM7Q14831 915 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 DPYSL2Q16555 572 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 EMC4Q5J8M3 183 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 ACER2Q5QJU3 275 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 FAM151BQ6UXP7 276 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 ACAD11Q709F0 780 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 LRRC49Q8IUZ0 686 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 FAM98AQ8NCA5 519 aaKnown RBP11.21□□□□□ -0.61
SMAD5-210ENST00000515005 IMMP1LQ96LU5 166 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 ZNF700Q9H0M5 742 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 ZNF304Q9HCX3 659 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 IL1RAPL1Q9NZN1 696 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 AMACRQ9UHK6 382 aa11.21□□□□□ -0.61
SMAD5-210ENST00000515005 RASGRF2O14827 1237 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 FFAR3O14843 346 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 GPR42O15529 346 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 SGTAO43765 313 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 MFSD11O43934 449 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 MAN1A2O60476 641 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 RNF8O76064 485 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 SP1P08047 785 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 ICAM2P13598 275 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 MSH3P20585 1137 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 IL1R2P27930 398 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 AKT1P31749 480 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 AP2B1P63010 937 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 GALNT2Q10471 571 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 MAMLD1Q13495 774 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 PPP2R5EQ16537 467 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 FLYWCH1Q4VC44 716 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 YOD1Q5VVQ6 348 aaPredicted RBP11.2□□□□□ -0.62
SMAD5-210ENST00000515005 FBXW10Q5XX13 1052 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 TIGD7Q6NT04 549 aaPredicted RBP11.2□□□□□ -0.62
SMAD5-210ENST00000515005 P3H2Q8IVL5 708 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 ULK2Q8IYT8 1036 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 OR10Q1Q8NGQ4 319 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
SMAD5-210ENST00000515005 MENTQ9BUN1 341 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 TRIM7Q9C029 511 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 OR52A5Q9H2C5 316 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 NDST4Q9H3R1 872 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 MVB12BQ9H7P6 319 aa11.2□□□□□ -0.62
SMAD5-210ENST00000515005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMAD5-210ENST00000515005 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 LOC102723996A0A087X1L8 192 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 RCCD1A6NED2 376 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 KCNAB3O43448 404 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 CDC40O60508 579 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 NEURL1O76050 574 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 TCF4P15884 667 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 MAGP20916 626 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 PDHA2P29803 388 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 PEBP1P30086 187 aaKnown RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 GRIA3P42263 894 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 ZFP36L2P47974 494 aaKnown RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 BOP1Q14137 746 aaKnown RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 DAZAP2Q15038 168 aaPredicted RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 PCSK7Q16549 785 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 MAPKAPK3Q16644 382 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 MAN2A1Q16706 1144 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 SLC25A25Q6KCM7 469 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 MCOLN2Q8IZK6 566 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 OR5M3Q8NGP4 307 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 FAM222BQ8WU58 562 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 HSPH1Q92598 858 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 TMEM125Q96AQ2 219 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 LINC00615Q96LM1 132 aaPredicted RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 ZNF354BQ96LW1 612 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 NPAS2Q99743 824 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 HAUS2Q9NVX0 235 aa11.19□□□□□ -0.62
SMAD5-210ENST00000515005 STOX2Q9P2F5 926 aaPredicted RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 HOOK1Q9UJC3 728 aaKnown RBP11.19□□□□□ -0.62
SMAD5-210ENST00000515005 TGP01266 2768 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 A0A0G2JNJ9 132 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 ISM1B1AKI9 464 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 IFRD1O00458 451 aaPredicted RBP11.18□□□□□ -0.62
SMAD5-210ENST00000515005 GAPDHSO14556 408 aaPredicted RBP11.18□□□□□ -0.62
SMAD5-210ENST00000515005 PHF1O43189 567 aaPredicted RBP11.18□□□□□ -0.62
SMAD5-210ENST00000515005 SIX3O95343 332 aaPredicted RBP11.18□□□□□ -0.62
SMAD5-210ENST00000515005 IFNA2P01563 188 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 TPBGLP0DKB5 382 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 CCNCP24863 283 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 UQCRC1P31930 480 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 SHMT2P34897 504 aa11.18□□□□□ -0.62
SMAD5-210ENST00000515005 SOX5P35711 763 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms