RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 HPGDP15428 266 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 RPS3P23396 243 aaKnown RBP eCLIP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 LMO2P25791 158 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 LDLRAD1Q5T700 205 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 LILRA2Q8N149 483 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 POF1BQ8WVV4 589 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 PYURFQ96I23 114 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 C8orf48Q96LL4 319 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 NAA50Q9GZZ1 169 aaKnown RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 SLITRK2Q9H156 845 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GPN1Q9HCN4 374 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GIMAP2Q9UG22 337 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 ABCG2Q9UNQ0 655 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 DLGAP1O14490 977 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 SYN1P17600 705 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 RPL3P39023 403 aaKnown RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GPR1P46091 355 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 NUDT6P53370 316 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 TLE2Q04725 743 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 RGL4Q8IZJ4 473 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GTPBP3Q969Y2 492 aaKnown RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 ESAMQ96AP7 390 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 MSANTD3Q96H12 275 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 TWNKQ96RR1 684 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 G3V2L1 256 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 ARVCFO00192 962 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 PER2O15055 1255 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 TEX28O15482 410 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 MC4RP32245 332 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GMPRP36959 345 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 OLIG2Q13516 323 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GTF2H2Q13888 395 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 CPTPQ5TA50 214 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 RAET1GQ6H3X3 334 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 DESI1Q6ICB0 168 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 LIN54Q6MZP7 749 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 GTF2H2CQ6P1K8 395 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 OR7G1Q8NGA0 311 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 TEX47Q8TBZ9 253 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 PCED1BQ96HM7 432 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 FCRL3Q96P31 734 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-211ENST00000513346 KCNC2Q96PR1 638 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 BEX2Q9BXY8 128 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 MROQ9BYG7 248 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 RACGAP1Q9H0H5 632 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 MCUBQ9NWR8 336 aa11.01□□□□□ -0.65
TCOF1-211ENST00000513346 MYBPHLA2RUH7 354 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 GABRDO14764 452 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 SYN3O14994 580 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CHST10O43529 356 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CCNB2O95067 398 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CTSEP14091 401 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 POU2F1P14859 743 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF26P17031 533 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 CTPS1P17812 591 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 RAB30Q15771 203 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 DPY19L3Q6ZPD9 716 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF767PQ75MW2 155 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 SPARTQ8N0X7 666 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 C10orf53Q8N6V4 93 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF296Q8WUU4 475 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 TCF25Q9BQ70 676 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 C20orf27Q9GZN8 174 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 KIAA1522Q9P206 1035 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 RABL2AQ9UBK7 228 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 PRRC2BQ5JSZ5 2229 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 GSAPA4D1B5 854 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 NME4O00746 187 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 OR7A10O76100 309 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 EOMESO95936 686 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CHRM5P08912 532 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 RPL10P27635 214 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 NOS3P29474 1203 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 SLC6A4P31645 630 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 SCNN1AP37088 669 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF132P52740 706 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 RPS14P62263 151 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF252P-AS1Q0IIN9 211 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 ZSCAN2Q7Z7L9 614 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 KRT78Q8N1N4 520 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 OR4K2Q8NGD2 314 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CLEC4CQ8WTT0 213 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 SMG7Q92540 1137 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 DHRS1Q96LJ7 313 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 KCTD7Q96MP8 289 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 LPIN3Q9BQK8 851 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CCDC32Q9BV29 185 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 FNDC11Q9BVV2 318 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 KIFC1Q9BW19 673 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 RNF11Q9Y3C5 154 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 FGF19O95750 216 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 GOT2P00505 430 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 TRBC1P01850 177 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 MAZP56270 477 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms