RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SLC24A5Q71RS6 500 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 G2E3Q7L622 706 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 TAOK1Q7L7X3 1001 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ADGRA1Q86SQ6 560 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ERICH1Q86X53 443 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 RPAP2Q8IXW5 612 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 SPATA6LQ8N4H0 392 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 TTC39CQ8N584 583 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 WDTC1Q8N5D0 677 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 SSC4DQ8WTU2 575 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 NUDCD2Q8WVJ2 157 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 POMGNT1Q8WZA1 660 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 SGCDQ92629 289 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ELSPBP1Q96BH3 223 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 CMTM3Q96MX0 182 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 GAD1Q99259 594 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 SDF4Q9BRK5 362 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 HAUS8Q9BT25 410 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 TRMT61BQ9BVS5 477 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 APOL6Q9BWW8 343 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 MRPL9Q9BYD2 267 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 NT5C3AQ9H0P0 336 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 PDZD7Q9H5P4 517 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 MMP25Q9NPA2 562 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 HINT3Q9NQE9 182 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 MRPL17Q9NRX2 175 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 SETD4Q9NVD3 440 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 FBXO2Q9UK22 296 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 CCPG1Q9ULG6 757 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ISY1Q9ULR0 285 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 PADI3Q9ULW8 664 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 FBN1P35555 2871 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 WDR81Q562E7 1941 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ABCB11O95342 1321 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 IGSF9BQ9UPX0 1349 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 hDV102S1A0JD36 115 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 A6NCN8 305 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 PRSS47A8MTI9 375 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 PTGES3LE9PB15 166 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 SCAMP1O15126 338 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 HNRNPCL1O60812 293 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 NDUFS7O75251 213 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 CIAO1O76071 339 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAGE7O76087 117 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GFPT2O94808 682 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 NKX2-2O95096 273 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 OR2C1O95371 312 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 APBB3O95704 486 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 SERPINF2P08697 491 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 ACAA1P09110 424 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAGE12FP0CL80 117 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAGE12GP0CL81 117 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAGE12IP0CL82 117 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 G6PDP11413 515 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 IL7RP16871 459 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF12P17014 697 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 CALML3P27482 149 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 STX2P32856 288 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 PPARGP37231 505 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 HADHAP40939 763 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 UBA7P41226 1012 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAS1P54826 345 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 MRPS6P82932 125 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAGE1Q13065 139 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GAGE4Q13068 117 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 CRYMQ14894 314 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 NFATC4Q14934 902 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 IGFBP7Q16270 282 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 MEA1Q16626 185 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 DUOXA1Q1HG43 343 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 EIF2S3LQ2VIR3 472 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 AMZ1Q400G9 498 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 USH1GQ495M9 461 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GGNBP1Q5YKI7 109 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 GSG1LQ6UXU4 331 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 PQLC2Q6ZP29 291 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 LPCAT2Q7L5N7 544 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 TMPRSS12Q86WS5 348 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 FOXRED2Q8IWF2 684 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 CCDC13Q8IYE1 715 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 NEUROG1Q92886 237 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 IGSF8Q969P0 613 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 ARHGEF26Q96DR7 871 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 SPATA33Q96N06 139 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 CASD1Q96PB1 797 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 SH3GL2Q99962 352 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 C16orf70Q9BSU1 422 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 NDST4Q9H3R1 872 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 C8orf33Q9H7E9 229 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 PPP1R3EQ9H7J1 279 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 KAT14Q9H8E8 782 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF334Q9HCZ1 680 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 RANGRFQ9HD47 186 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 CNGB3Q9NQW8 809 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 RGS18Q9NS28 235 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 SLC9A2Q9UBY0 812 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 TINAGQ9UJW2 476 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF215Q9UL58 517 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 MTMR6Q9Y217 621 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 FN1P02751 2386 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms