RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 A0A1B0GUH1 482 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 SLC22A23A1A5C7 686 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 VWA3AA6NCI4 1184 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3FA6NER0 549 aaPredicted RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 OR2W5A6NFC9 320 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3LB9A6J9 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 PIRO00625 290 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 PRYO14603 147 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 MAP2K7O14733 419 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 SPTLC2O15270 562 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 AQP9O43315 295 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 STX10O60499 249 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CCNT2O60583 730 aaKnown RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 COQ9O75208 318 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CTDNEP1O95476 244 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TDP2O95551 362 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CYP21A2P08686 494 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 STSP08842 583 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3HP0C7X1 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CYP3A5P20815 502 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CMA1P23946 247 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 NFKBIAP25963 317 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TNNT3P45378 269 aaPredicted RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 RABIFP47224 123 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CPA2P48052 419 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 NDUFA8P51970 172 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 HNRNPKP61978 463 aaKnown RBP eCLIP5.32□□□□□ -1.56
GYPB-212ENST00000511198 MYL7Q01449 175 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 Q0VFX4 171 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TAF10Q12962 218 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 PPP2R5CQ13362 524 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CNGA3Q16281 694 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 RAP1GAP2Q684P5 730 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3GQ6DHY5 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3CQ6IPX1 549 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 METTL23Q86XA0 190 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 ZDHHC17Q8IUH5 632 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CEP97Q8IW35 865 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 CCDC28AQ8IWP9 274 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TBC1D3Q8IZP1 549 aaPredicted RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 MSANTD4Q8NCY6 345 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 NEK11Q8NG66 645 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 BCAS4Q8TDM0 211 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 NSMCE1Q8WV22 266 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 SMARCE1Q969G3 411 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 SPATA17Q96L03 361 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TCEANC2Q96MN5 208 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 TRMOQ9BU70 441 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 NAA15Q9BXJ9 866 aaKnown RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 CALN1Q9BXU9 219 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 RNF26Q9BY78 433 aaPredicted RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 FUT8Q9BYC5 575 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 PLA2G12AQ9BZM1 189 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 GLT8D2Q9H1C3 349 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 C2orf40Q9H1Z8 148 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 POLD4Q9HCU8 107 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 POT1Q9NUX5 634 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 HOOK1Q9UJC3 728 aaKnown RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 PPP2R2CQ9Y2T4 447 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 SIRT4Q9Y6E7 314 aaPredicted RBP5.32□□□□□ -1.56
GYPB-212ENST00000511198 RNF215Q9Y6U7 377 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 AKAP6Q13023 2319 aa5.32□□□□□ -1.56
GYPB-212ENST00000511198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.32□□□□□ -1.56
GYPB-212ENST00000511198 SCN1AP35498 2009 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 CYP3A7-CYP3A51PA0A087WV96 503 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 TTC26A0AVF1 554 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 FAM90A10PA6NDY2 464 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 PRAMEF26H0Y7S4 382 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 E2F3O00716 465 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 POLR3GO15318 223 aaPredicted RBP5.31□□□□□ -1.56
GYPB-212ENST00000511198 HCRTO43612 131 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 TOMM40O96008 361 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 SERPINC1P01008 464 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 PENKP01210 267 aaPredicted RBP5.31□□□□□ -1.56
GYPB-212ENST00000511198 CSF2P04141 144 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 CD63P08962 238 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 FGF2P09038 288 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 MCF2P10911 925 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 PSG1P11464 419 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 PFKFB1P16118 471 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 GOT1P17174 413 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 CYP3A7P24462 503 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 ACAT1P24752 427 aaKnown RBP5.31□□□□□ -1.56
GYPB-212ENST00000511198 GABRB3P28472 473 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 SLC8A1P32418 973 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 PPP3CCP48454 512 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 PRIM2P49643 509 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 UBASH3AP57075 661 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 CEBPZQ03701 1054 aaKnown RBP5.31□□□□□ -1.56
GYPB-212ENST00000511198 TBX2Q13207 712 aaPredicted RBP5.31□□□□□ -1.56
GYPB-212ENST00000511198 RAPGEF1Q13905 1077 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 FZD2Q14332 565 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 CST6Q15828 149 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 CFAP221Q4G0U5 840 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 C9orf57Q5W0N0 161 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 HMBOX1Q6NT76 420 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 MRNIPQ6NTE8 343 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 DENND5BQ6ZUT9 1274 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 ANKS1BQ7Z6G8 1248 aa5.31□□□□□ -1.56
GYPB-212ENST00000511198 KCNMB4Q86W47 210 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms