RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 S100A3P33764 101 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 GJA4P35212 333 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 MSX2P35548 267 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 OPRD1P41143 372 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 HALP42357 657 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 TNFRSF4P43489 277 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 ASMTP46597 345 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 TRPC1P48995 793 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 CTSCP53634 463 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 GRM2Q14416 872 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 CAPRIN1Q14444 709 aaKnown RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 LRRC36Q1X8D7 754 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 ITPRIPL2Q3MIP1 535 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 SPIN4Q56A73 249 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 PAGE2BQ5JRK9 111 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 TBCELQ5QJ74 424 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 ATAT1Q5SQI0 421 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 C9orf50Q5SZB4 431 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 LRIF1Q5T3J3 769 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 PPP2R2DQ66LE6 453 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 ANKRD54Q6NXT1 300 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 SLC2A7Q6PXP3 512 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 VITQ6UXI7 678 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 SPRED2Q7Z698 418 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 ST13P4Q8IZP2 240 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 TMEM132CQ8N3T6 1108 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 BEND7Q8N7W2 519 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 WDR20Q8TBZ3 569 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 MYLIPQ8WY64 445 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 SLCO4A1Q96BD0 722 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 PPWD1Q96BP3 646 aaKnown RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 CXorf40BQ96DE9 158 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 CENPNQ96H22 339 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 COX14Q96I36 57 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 HIC2Q96JB3 615 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 ZNF597Q96LX8 424 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 NSMCE2Q96MF7 247 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 HHIPQ96QV1 700 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 MYCBPQ99417 103 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 C9orf16Q9BUW7 83 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 OSBPL11Q9BXB4 747 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 RSPH9Q9H1X1 276 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 KCNH6Q9H252 994 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 MTG2Q9H4K7 406 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 GORASP2Q9H8Y8 452 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 PRSS16Q9NQE7 514 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 AGPAT4Q9NRZ5 378 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 SPATA6Q9NWH7 488 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 VPS29Q9UBQ0 182 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 MBD1Q9UIS9 605 aaPredicted RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 ANAPC2Q9UJX6 822 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 PPT2Q9UMR5 302 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 YBX2Q9Y2T7 364 aaKnown RBP8.98□□□□□ -0.97
HTT-205ENST00000509043 FADS3Q9Y5Q0 445 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 AP1M2Q9Y6Q5 423 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 KIAA1549LQ6ZVL6 1849 aa8.98□□□□□ -0.97
HTT-205ENST00000509043 TCRBV5S2A0A599 114 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 FOXE1O00358 373 aaPredicted RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 AKAP10O43572 662 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 MMP20O60882 483 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 SCELO95171 688 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 C1orf105O95561 183 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 EPHX1P07099 455 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 ANXA6P08133 673 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 CDH1P12830 882 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 ZNF26P17031 533 aaPredicted RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 AMD1P17707 334 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 C5AR1P21730 350 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 IMPA1P29218 277 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 SERPINB1P30740 379 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 RPL3P39023 403 aaKnown RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 P2RY2P41231 377 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 IL12RB1P42701 662 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 CHN2P52757 468 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 PHEXP78562 749 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 HMGCS1Q01581 520 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 MTAPQ13126 283 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 NAE1Q13564 534 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 PTGR1Q14914 329 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 ARHGAP19Q14CB8 494 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 PDK3Q15120 406 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 SHHQ15465 462 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 HIST2H2ACQ16777 129 aaPredicted RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 ZXDCQ2QGD7 858 aaPredicted RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 FAM174BQ3ZCQ3 159 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 RUNDC3AQ59EK9 446 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 SGO1Q5FBB7 561 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 XKR6Q5GH73 641 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 RABL3Q5HYI8 236 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 TMTC4Q5T4D3 741 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 HIST2H2AA3Q6FI13 130 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 FAM109BQ6ICB4 259 aaPredicted RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 TANGO2Q6ICL3 276 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 CAPRIN2Q6IMN6 1127 aaKnown RBP8.97□□□□□ -0.97
HTT-205ENST00000509043 CES5AQ6NT32 575 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 PPP4R4Q6NUP7 873 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 NOXRED1Q6NXP6 359 aa8.97□□□□□ -0.97
HTT-205ENST00000509043 CYP2R1Q6VVX0 501 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms