RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C9J4A7 227 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 H3BMH7 237 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 H3BMM5 538 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 USP1O94782 785 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 S1PR4O95977 384 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 HBQ1P09105 142 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 RAB40ALP0C0E4 278 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 SLC1A2P43004 574 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 TLE1Q04724 770 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 NCF4Q15080 339 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 LONRF1Q17RB8 773 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 KLHL38Q2WGJ6 581 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 FCRL6Q6DN72 434 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 RAB42Q8N4Z0 105 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 DENND1AQ8TEH3 1009 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 SEC14L1Q92503 715 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 SLC22A18Q96BI1 424 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 ACAT2Q9BWD1 397 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 RAB11FIP5Q9BXF6 653 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 EPN3Q9H201 632 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 INTS10Q9NVR2 710 aaKnown RBP14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 EURLQ9NYK6 297 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 NDOR1Q9UHB4 597 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 GPN3Q9UHW5 284 aaPredicted RBP14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 PCM1Q15154 2024 aa14.24□□□□□ -0.13
UBE2D3-228ENST00000508974 MED13Q9UHV7 2174 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 MAGEB16A2A368 324 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 NRP2O60462 931 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ALAS2P22557 587 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 MCM3P25205 808 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 OTX2P32243 289 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 CCL11P51671 97 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 YBX1P67809 324 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 MPP1Q00013 466 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 FASTKQ14296 549 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 RNASEH2BQ5TBB1 312 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ZNF385CQ66K41 422 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ZNF549Q6P9A3 640 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 FIGLAQ6QHK4 219 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 MCATQ8IVS2 390 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 KLHL7Q8IXQ5 586 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 GIMAP7Q8NHV1 300 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 THAP4Q8WY91 577 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ANP32BQ92688 251 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 SIGLEC10Q96LC7 697 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 NDC1Q9BTX1 674 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ING2Q9H160 280 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 CCDC68Q9H2F9 335 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ACSS2Q9NR19 701 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 IARS2Q9NSE4 1012 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 ABCF3Q9NUQ8 709 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 INTS7Q9NVH2 962 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 IFT80Q9P2H3 777 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 AP1M2Q9Y6Q5 423 aa14.23□□□□□ -0.13
UBE2D3-228ENST00000508974 SPENQ96T58 3664 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 ARHGEF33A8MVX0 844 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 CES2O00748 559 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 DNALI1O14645 258 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 WISP1O95388 367 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 MATN4O95460 622 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 RECKO95980 971 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 PDGFAP04085 211 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 TCP1P17987 556 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 CCNFP41002 786 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 MAGEA3P43357 314 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 CLCN7P51798 805 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 ADARP55265 1226 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 GNG11P61952 73 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 DHX9Q08211 1270 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 ATP1A4Q13733 1029 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 PTK6Q13882 451 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 GBX1Q14549 363 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 HSP90AA5PQ58FG0 334 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 HP1BP3Q5SSJ5 553 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 RHBDD2Q6NTF9 364 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 TLDC1Q6P9B6 456 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 SUSD1Q6UWL2 747 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 TTLL10Q6ZVT0 673 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 ASB18Q6ZVZ8 466 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 KCNMB4Q86W47 210 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 APLFQ8IW19 511 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 TMEM151BQ8IW70 566 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 METTL27Q8N6F8 245 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 MAGEC3Q8TD91 643 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 ADAMTS17Q8TE56 1095 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 GBP5Q96PP8 586 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 DPH2Q9BQC3 489 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 PYCARDQ9ULZ3 195 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 VPS9D1Q9Y2B5 631 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 PTRH2Q9Y3E5 179 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 MRFAP1Q9Y605 127 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 MYO18BQ8IUG5 2567 aa14.22□□□□□ -0.13
UBE2D3-228ENST00000508974 A6NL46 340 aa14.21□□□□□ -0.13
UBE2D3-228ENST00000508974 PRICKLE3O43900 615 aaPredicted RBP14.21□□□□□ -0.13
UBE2D3-228ENST00000508974 CTSVO60911 334 aa14.21□□□□□ -0.13
UBE2D3-228ENST00000508974 HAUS5O94927 633 aa14.21□□□□□ -0.13
UBE2D3-228ENST00000508974 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
UBE2D3-228ENST00000508974 ERVK-10P10266 1014 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms