RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FRMD8P1Q9BZ68 369 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C12orf49Q9H741 205 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PRSS16Q9NQE7 514 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 KBTBD4Q9NVX7 518 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MKS1Q9NXB0 559 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OGFRQ9NZT2 677 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OPTCQ9UBM4 332 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TNFRSF10DQ9UBN6 386 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SLC9A8Q9Y2E8 581 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 POLEQ07864 2286 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SDR42E2A6NKP2 422 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 H7C0S8 307 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RTCAO00442 366 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 AKAP10O43572 662 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SNAP91O60641 907 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SNRPAP09012 282 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C7P10643 843 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NAT2P11245 290 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C6P13671 934 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TSHRP16473 764 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C4BPBP20851 252 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NT5EP21589 574 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 LPOP22079 712 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ATP5F1P24539 256 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TALDO1P37837 337 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DNASE1L1P49184 302 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF143P52747 638 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ARFIP2P53365 341 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MYBPC1Q00872 1141 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CACNG1Q06432 222 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PPP3CAQ08209 521 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 WLSQ5T9L3 541 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ABHD17BQ5VST6 288 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SULT1C3Q6IMI6 304 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SYCE2Q6PIF2 218 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NPNTQ6UXI9 565 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TMPPEQ6ZT21 453 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SYDE1Q6ZW31 735 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GPR155Q7Z3F1 870 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 VASH2Q86V25 355 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FMR1NBQ8N0W7 255 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 KYQ8NBH2 561 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PRSS33Q8NF86 280 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ENKURQ8TC29 256 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SLC22A18Q96BI1 424 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MIEF2Q96C03 454 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CATSPER2Q96P56 530 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GPATCH1Q9BRR8 931 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SLC4A5Q9BY07 1137 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CHRDQ9H2X0 955 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C12orf65Q9H3J6 166 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FAM83DQ9H4H8 585 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 BLOC1S4Q9NUP1 217 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TAAR2Q9P1P5 351 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RIMKLBQ9ULI2 386 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CAMK2AQ9UQM7 478 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 BTBD3Q9Y2F9 522 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MAU2Q9Y6X3 613 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 THADAQ6YHU6 1953 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CEP192Q8TEP8 1941 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 XKRYO14609 159 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TNFRSF10BO14763 440 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ALOX15BO15296 676 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RGS5O15539 181 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 STX11O75558 287 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ITGB7P26010 798 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SSR2P43308 183 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GCNT1Q02742 428 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ACAP1Q15027 740 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PKDCCQ504Y2 493 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RHBDF2Q6PJF5 856 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RTL4Q6ZR62 310 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MILR1Q7Z6M3 343 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PLD3Q8IV08 490 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TMIEQ8NEW7 156 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OR52L1Q8NGH7 329 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OR2I1PQ8NGU4 316 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CPT1CQ8TCG5 803 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SGCDQ92629 289 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GPER1Q99527 375 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 COPS8Q99627 209 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MRPS26Q9BYN8 205 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 HRASLS2Q9NWW9 162 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TSC2P49815 1807 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ACACAQ13085 2346 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IGHV1OR15-9A0A0B4J2B8 117 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 A0A0D9SEW6 157 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CIB4A0PJX0 185 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MAGEB16A2A368 324 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 BCLAF3A2AJT9 711 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TRPC5OSA6NMA1 111 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 YJEFN3A6XGL0 299 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 E7ENQ6 273 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 H3BN98 237 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PENKP01210 267 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CKMT2P17540 419 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 EPORP19235 508 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ATP5A1P25705 553 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RPL3P39023 403 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PREPP48147 710 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms