RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 CHIT1Q13231 466 aa21.44■■□□□ 1.02
SPCS3-203ENST00000507678 ZNF641Q96N77 438 aaPredicted RBP21.44■■□□□ 1.02
SPCS3-203ENST00000507678 MTERF1Q99551 399 aaKnown RBP21.44■■□□□ 1.02
SPCS3-203ENST00000507678 EMILIN2Q9BXX0 1053 aa21.44■■□□□ 1.02
SPCS3-203ENST00000507678 SMURF2Q9HAU4 748 aa21.44■■□□□ 1.02
SPCS3-203ENST00000507678 PCDH12Q9NPG4 1184 aa21.44■■□□□ 1.02
SPCS3-203ENST00000507678 GPRC5BQ9NZH0 403 aa21.44■■□□□ 1.02
SPCS3-203ENST00000507678 RSL24D1Q9UHA3 163 aaKnown RBP21.44■■□□□ 1.02
SPCS3-203ENST00000507678 SNX6Q9UNH7 406 aa21.44■■□□□ 1.02
SPCS3-203ENST00000507678 CST1P01037 141 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 SLC47A1Q96FL8 570 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 SPHK2Q9NRA0 654 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 TMEM45AQ9NWC5 275 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 ITM2BQ9Y287 266 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 GRXCR2A6NFK2 248 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 XPAP23025 273 aaPredicted RBP21.43■■□□□ 1.02
SPCS3-203ENST00000507678 POLR2LP62875 67 aaKnown RBP21.43■■□□□ 1.02
SPCS3-203ENST00000507678 TSTA3Q13630 321 aaPredicted RBP21.43■■□□□ 1.02
SPCS3-203ENST00000507678 FXNQ16595 210 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 ABRAXAS1Q6UWZ7 409 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 CYP2U1Q7Z449 544 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 GLB1L3Q8NCI6 653 aaPredicted RBP21.43■■□□□ 1.02
SPCS3-203ENST00000507678 HM13Q8TCT9 377 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 MCOLN3Q8TDD5 553 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 FAM120BQ96EK7 910 aaKnown RBP21.43■■□□□ 1.02
SPCS3-203ENST00000507678 ZSWIM3Q96MP5 696 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 MUS81Q96NY9 551 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 SLC29A3Q9BZD2 475 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 PPT2Q9UMR5 302 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 PPIL1Q9Y3C6 166 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 DENND4CQ5VZ89 1909 aa21.43■■□□□ 1.02
SPCS3-203ENST00000507678 UPK1AO00322 258 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 C8GP07360 202 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 SDC1P18827 310 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 POLR2EP19388 210 aaKnown RBP21.42■■□□□ 1.02
SPCS3-203ENST00000507678 CYP2A7P20853 494 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 ELK4P28324 431 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 ARSFP54793 590 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 CREMQ03060 361 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 OR4F3Q6IEY1 312 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 CLVS1Q8IUQ0 354 aaPredicted RBP21.42■■□□□ 1.02
SPCS3-203ENST00000507678 LZICQ8WZA0 190 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 PLXNB3Q9ULL4 1909 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 IGLV3-16A0A075B6K0 115 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 A0A087WXM4 84 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 TULP3O75386 442 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 TIMP1P01033 207 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 RHOP08100 348 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 PTPN5P54829 565 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 CCSMST1Q4G0I0 132 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 RUNDC3AQ59EK9 446 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 PRR23BQ6ZRT6 265 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 LRRC70Q7Z2Q7 622 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 TNIP2Q8NFZ5 429 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 DNAJC11Q9NVH1 559 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 PCDHGA11Q9Y5H2 935 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 FADS2P1A8MWK0 482 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 PRKACGP22612 351 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 EEF1B2P24534 225 aaKnown RBP21.42■■□□□ 1.02
SPCS3-203ENST00000507678 ALDH3B2P48448 385 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 ANKRD26P1Q6NSI1 321 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 NETO1Q8TDF5 533 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 HEPHQ9BQS7 1158 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 ERVW-1Q9UQF0 538 aa21.42■■□□□ 1.02
SPCS3-203ENST00000507678 ZNF106Q9H2Y7 1883 aaKnown RBP21.41■■□□□ 1.02
SPCS3-203ENST00000507678 NUAK1O60285 661 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 SERPINA1P01009 418 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 CTSLP07711 333 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 IRF8Q02556 426 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 SYTL3Q4VX76 610 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 SPESP1Q6UW49 350 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 GPR141Q7Z602 305 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 GALNT10Q86SR1 603 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 ZDHHC13Q8IUH4 622 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 LMNTD1Q8N9Z9 388 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 WRAP53Q9BUR4 548 aaKnown RBP21.41■■□□□ 1.02
SPCS3-203ENST00000507678 UGT2B28Q9BY64 529 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 PAIP1Q9H074 479 aaKnown RBP21.41■■□□□ 1.02
SPCS3-203ENST00000507678 MAFFQ9ULX9 164 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 CFAP99D6REC4 459 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 G3V2T6 193 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 TSPAN6O43657 245 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 TRMUO75648 421 aaKnown RBP21.41■■□□□ 1.02
SPCS3-203ENST00000507678 CLCN2P51788 898 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 CTSCP53634 463 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 SLC14A1Q13336 389 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 NEDD8Q15843 81 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 XKR6Q5GH73 641 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 ADNP2Q6IQ32 1131 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 SPRED2Q7Z698 418 aa21.41■■□□□ 1.02
SPCS3-203ENST00000507678 PATL1Q86TB9 770 aaKnown RBP21.41■■□□□ 1.02
SPCS3-203ENST00000507678 PNPT1Q8TCS8 783 aaKnown RBP21.41■■□□□ 1.02
SPCS3-203ENST00000507678 MOSPD3O75425 235 aa21.4■■□□□ 1.02
SPCS3-203ENST00000507678 MAP4P27816 1152 aaKnown RBP21.4■■□□□ 1.02
SPCS3-203ENST00000507678 KCTD21Q4G0X4 260 aa21.4■■□□□ 1.02
SPCS3-203ENST00000507678 TMEM259Q4ZIN3 620 aa21.4■■□□□ 1.02
SPCS3-203ENST00000507678 FRG2Q64ET8 278 aa21.4■■□□□ 1.02
SPCS3-203ENST00000507678 NECAB2Q7Z6G3 386 aa21.4■■□□□ 1.02
SPCS3-203ENST00000507678 MICU2Q8IYU8 434 aa21.4■■□□□ 1.02
SPCS3-203ENST00000507678 OR7A2PQ8NGA2 310 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms