RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 A0A1W2PPV9 198 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 KRT87PA6NCN2 255 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 GOLGA8MH3BSY2 632 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PFDN6O15212 129 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 KIF5CO60282 957 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PSIP1O75475 530 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CEACAM4O75871 244 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 DNAJB5O75953 348 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 USP1O94782 785 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 ZIC2O95409 532 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 ONECUT2O95948 504 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CBSLP0DN79 551 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PKMP14618 531 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CBSP35520 551 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CASRP41180 1078 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PTGIRP43119 386 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CSRP3P50461 194 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CLCN7P51798 805 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PRSS12P56730 875 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CYP2A13Q16696 494 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 ACSBG2Q5FVE4 666 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 RNASEH2BQ5TBB1 312 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 FAM69BQ5VUD6 431 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PAPD7Q5XG87 772 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CPZQ66K79 652 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF470Q6ECI4 717 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 CASC4Q6P4E1 433 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 ZNF549Q6P9A3 640 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 TTC23LQ6PF05 361 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 FIGLAQ6QHK4 219 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 DENND6AQ8IWF6 608 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 LMNTD2Q8IXW0 634 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PPIL6Q8IXY8 311 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 C2orf73Q8N5S3 287 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 OTUD6BQ8N6M0 293 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 OR2A1Q8NGT9 310 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 GIMAP7Q8NHV1 300 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 GSDMBQ8TAX9 411 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PROKR1Q8TCW9 393 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 N4BP2L2Q92802 583 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PDLIM2Q96JY6 352 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 SLC30A3Q99726 388 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 EPN3Q9H201 632 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 MLXIPLQ9NP71 852 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 TRMT1Q9NXH9 659 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 EURLQ9NYK6 297 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 SPATA7Q9P0W8 599 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 KLHL42Q9P2K6 505 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 SLC39A10Q9ULF5 831 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 SRPK3Q9UPE1 567 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 VPS9D1Q9Y2B5 631 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 KLHL20Q9Y2M5 609 aa8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 PCDHGA9Q9Y5G4 932 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-209ENST00000506632 ANKRD12Q6UB98 2062 aa8.71□□□□□ -1.01
PDLIM5-209ENST00000506632 FITM1A5D6W6 292 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 USP27XA6NNY8 438 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 ARHGEF33A8MVX0 844 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 TARM1B6A8C7 271 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 C9J4A7 227 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 MYO1CO00159 1063 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 DNALI1O14645 258 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 CTSVO60911 334 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 CNOT3O75175 753 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 PDGFAP04085 211 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 F7P08709 466 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 TCP1P17987 556 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 CHRM3P20309 590 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 NR1D1P20393 614 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 ITGAXP20702 1163 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 AGXTP21549 392 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 IVDP26440 423 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 PSMB5P28074 263 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 GRIA3P42263 894 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC1A2P43004 574 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 DCDP81605 110 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 TLE1Q04724 770 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 CTBP1Q13363 440 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 PTK6Q13882 451 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 LONRF1Q17RB8 773 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 KLHL38Q2WGJ6 581 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 NKAIN1Q4KMZ8 207 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 CNSTQ6PJW8 725 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 NEK10Q6ZWH5 1172 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 TAX1BP1Q86VP1 789 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 MCATQ8IVS2 390 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 ZBTB2Q8N680 514 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 ZNF655Q8N720 491 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 FBXO15Q8NCQ5 510 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 OR2L3Q8NG85 312 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 MAGEC3Q8TD91 643 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 KCNJ9Q92806 393 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 ZUFSPQ96AP4 578 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 FAM136AQ96C01 138 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 FOPNLQ96NB1 174 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 C17orf62Q9BQA9 187 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC7A5P2Q9GIP4 190 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 ING2Q9H160 280 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 CLMPQ9H6B4 373 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms