RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CLPXO76031 633 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HIST1H2AGP0C0S8 130 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HIST1H2ADP20671 130 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SERPINA4P29622 427 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CD70P32970 193 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 NRIP1P48552 1158 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PTSQ03393 145 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ITGADQ13349 1161 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 RAPSNQ13702 412 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ATP1A4Q13733 1029 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 BOP1Q14137 746 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SPCS2Q15005 226 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PTCHD3Q3KNS1 767 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 OR4F3Q6IEY1 312 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZCCHC8Q6NZY4 707 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZDHHC21Q8IVQ6 265 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PARP8Q8N3A8 854 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CDC26Q8NHZ8 85 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 UBTD2Q8WUN7 234 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 APIPQ96GX9 242 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HIST1H2AHQ96KK5 128 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 COPS8Q99627 209 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HIST1H2AJQ99878 128 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CPPED1Q9BRF8 314 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 TSEN34Q9BSV6 310 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 H2AFJQ9BTM1 129 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 EBPLQ9BY08 206 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 RAD21L1Q9H4I0 556 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 RIBC2Q9H4K1 309 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZNF334Q9HCZ1 680 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 FAIMQ9NVQ4 179 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 VNN3Q9NY84 501 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 USE1Q9NZ43 259 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SRRDQ9UH36 339 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SNX6Q9UNH7 406 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PABPN1LA6NDY0 278 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 FAM220BPB1ANY3 271 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 hCG_2039718K7EN88 272 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SLC1A7O00341 560 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 BCKDKO14874 412 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PQBP1O60828 265 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 BCAS1O75363 584 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 MTX2O75431 263 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 RECQL5O94762 991 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 IGSF6O95976 241 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CKMP06732 381 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SDC1P18827 310 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 EFNA1P20827 205 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 IGFBP5P24593 272 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HTR1BP28222 390 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 FMO3P31513 532 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HALP42357 657 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 GZMMP51124 257 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 RAD23AP54725 363 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 MLLT10P55197 1068 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PHEXP78562 749 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 B4GALNT1Q00973 533 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 LMAN2Q12907 356 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 NR1D2Q14995 579 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZNF691Q5VV52 312 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZNF551Q7Z340 670 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PIWIL3Q7Z3Z3 882 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 TMCO2Q7Z6W1 182 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CALHM3Q86XJ0 350 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HIPK1Q86Z02 1210 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 VRK3Q8IV63 474 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 BBS7Q8IWZ6 715 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 BEND7Q8N7W2 519 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 OR7A2PQ8NGA2 310 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 CD99L2Q8TCZ2 262 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 MAGED4Q96JG8 741 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 PANX1Q96RD7 426 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 P2RY13Q9BPV8 354 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 SLC29A3Q9BZD2 475 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 MAGIXQ9H6Y5 334 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 GPN2Q9H9Y4 310 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ASIC5Q9NY37 505 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 HECAQ9UBI9 543 aaPredicted RBP7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 ABCG2Q9UNQ0 655 aa7.42□□□□□ -1.22
PPARGC1A-204ENST00000506055 EVPLLA8MZ36 301 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 SH3BGRLO75368 114 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 OCM2P0CE71 109 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 OCMP0CE72 109 aaPredicted RBP7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 PTPN6P29350 595 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 CA8P35219 290 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 EPHB3P54753 998 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 CYP4F8P98187 520 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 EMX1Q04741 257 aaPredicted RBP7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 SF1Q15637 639 aaKnown RBP7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 CARD16Q5EG05 197 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 LRIF1Q5T3J3 769 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 CPZQ66K79 652 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 NEK5Q6P3R8 708 aa7.41□□□□□ -1.22
PPARGC1A-204ENST00000506055 ZNF621Q6ZSS3 439 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms